Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC116351.2-201ENST00000606540 1585 ntBASIC19.8■□□□□ 0.76
USP1O94782 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.8■□□□□ 0.76
USP1O94782 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.8■□□□□ 0.76
USP1O94782 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP1O94782 AC073210.2-201ENST00000430369 194 ntBASIC19.8■□□□□ 0.76
USP1O94782 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP1O94782 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.8■□□□□ 0.76
USP1O94782 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.8■□□□□ 0.76
USP1O94782 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.8■□□□□ 0.76
USP1O94782 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP1O94782 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP1O94782 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP1O94782 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
USP1O94782 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
USP1O94782 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 MIPEPP3-201ENST00000412105 444 ntBASIC19.79■□□□□ 0.76
USP1O94782 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.79■□□□□ 0.76
USP1O94782 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.79■□□□□ 0.76
USP1O94782 AC083906.2-201ENST00000511578 360 ntBASIC19.79■□□□□ 0.76
USP1O94782 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.79■□□□□ 0.76
USP1O94782 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.79■□□□□ 0.76
USP1O94782 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.79■□□□□ 0.76
USP1O94782 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP1O94782 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.79■□□□□ 0.76
USP1O94782 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
USP1O94782 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
USP1O94782 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
USP1O94782 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.78■□□□□ 0.76
USP1O94782 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
USP1O94782 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.78■□□□□ 0.76
USP1O94782 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.77■□□□□ 0.76
USP1O94782 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.77■□□□□ 0.76
USP1O94782 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.77■□□□□ 0.76
USP1O94782 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.77■□□□□ 0.76
USP1O94782 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.77■□□□□ 0.76
USP1O94782 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.77■□□□□ 0.76
USP1O94782 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.77■□□□□ 0.76
USP1O94782 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.77■□□□□ 0.76
USP1O94782 AC005829.2-201ENST00000571422 1056 ntBASIC19.77■□□□□ 0.76
USP1O94782 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.77■□□□□ 0.76
USP1O94782 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
USP1O94782 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
USP1O94782 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.77■□□□□ 0.76
USP1O94782 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
USP1O94782 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP1O94782 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.77■□□□□ 0.75
USP1O94782 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP1O94782 AP000974.1-201ENST00000623909 2387 ntBASIC19.77■□□□□ 0.75
USP1O94782 AC004408.2-201ENST00000623613 2777 ntBASIC19.77■□□□□ 0.75
USP1O94782 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
USP1O94782 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.76■□□□□ 0.75
USP1O94782 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
USP1O94782 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.76■□□□□ 0.75
USP1O94782 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.76■□□□□ 0.75
USP1O94782 AL390719.1-204ENST00000412397 1219 ntBASIC19.76■□□□□ 0.75
USP1O94782 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.76■□□□□ 0.75
USP1O94782 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms