Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AP000974.1-201ENST00000623909 2387 ntBASIC24.27■■□□□ 1.48
CHD1LQ86WJ1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CHD1LQ86WJ1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 PNMA6B-201ENST00000538162 1200 ntBASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.25■■□□□ 1.47
CHD1LQ86WJ1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 AC060766.5-201ENST00000590539 871 ntBASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.24■■□□□ 1.47
CHD1LQ86WJ1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 AC104771.1-201ENST00000603335 964 ntBASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CHD1LQ86WJ1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 AC090192.1-201ENST00000517740 490 ntBASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 AC142086.2-201ENST00000569753 217 ntBASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.22■■□□□ 1.47
CHD1LQ86WJ1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.21■■□□□ 1.47
CHD1LQ86WJ1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1LQ86WJ1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1LQ86WJ1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1LQ86WJ1 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1LQ86WJ1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD1LQ86WJ1 AC069152.1-201ENST00000438030 544 ntBASIC24.21■■□□□ 1.47
CHD1LQ86WJ1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms