Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VGLL3A8MV65 SIRPAP1-201ENST00000448467 1770 ntBASIC19.27■□□□□ 0.67
VGLL3A8MV65 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 LONRF2P2-201ENST00000439212 571 ntBASIC19.26■□□□□ 0.67
VGLL3A8MV65 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 Z82202.1-201ENST00000623446 1880 ntBASIC19.26■□□□□ 0.67
VGLL3A8MV65 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VGLL3A8MV65 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VGLL3A8MV65 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.25■□□□□ 0.67
VGLL3A8MV65 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
VGLL3A8MV65 FER1L4-210ENST00000615531 5998 ntBASIC19.25■□□□□ 0.67
VGLL3A8MV65 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 RARRES2P1-201ENST00000474487 481 ntBASIC19.24■□□□□ 0.67
VGLL3A8MV65 MIR4508-201ENST00000584178 70 ntBASIC19.24■□□□□ 0.67
VGLL3A8MV65 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC19.24■□□□□ 0.67
VGLL3A8MV65 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
VGLL3A8MV65 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.23■□□□□ 0.67
VGLL3A8MV65 CROCCP3-202ENST00000420820 1947 ntBASIC19.23■□□□□ 0.67
VGLL3A8MV65 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 BICD1-207ENST00000551848 1962 ntBASIC19.23■□□□□ 0.67
VGLL3A8MV65 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.23■□□□□ 0.67
VGLL3A8MV65 PVT1_1.1-201ENST00000615125 194 ntBASIC19.23■□□□□ 0.67
VGLL3A8MV65 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.23■□□□□ 0.67
VGLL3A8MV65 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
VGLL3A8MV65 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms