Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MAP1LC3AQ9H492 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
MAP1LC3AQ9H492 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
MAP1LC3AQ9H492 AC005332.8-201ENST00000622750 2735 ntBASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 KRT8P36-201ENST00000489121 1440 ntBASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 RARRES2P11-201ENST00000635158 484 ntBASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 CROCCP1-201ENST00000426910 5675 ntBASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MAP1LC3AQ9H492 AC009237.14-201ENST00000609975 1594 ntBASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
MAP1LC3AQ9H492 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3AQ9H492 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3AQ9H492 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3AQ9H492 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
MAP1LC3AQ9H492 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
MAP1LC3AQ9H492 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 AL390961.4-201ENST00000623958 2535 ntBASIC14.33□□□□□ -0.12
MAP1LC3AQ9H492 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms