Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 AC026271.2-201ENST00000428091 497 ntBASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 PHGDH-210ENST00000641115 1638 ntBASIC18.16■□□□□ 0.5
POLR2J3Q9H1A7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 RARRES2P6-201ENST00000567333 442 ntBASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
POLR2J3Q9H1A7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
POLR2J3Q9H1A7 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2J3Q9H1A7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
POLR2J3Q9H1A7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2J3Q9H1A7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2J3Q9H1A7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms