Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CALR3Q96L12 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.79■□□□□ 0.92
CALR3Q96L12 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.79■□□□□ 0.92
CALR3Q96L12 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CALR3Q96L12 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.79■□□□□ 0.92
CALR3Q96L12 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CALR3Q96L12 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CALR3Q96L12 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.78■□□□□ 0.92
CALR3Q96L12 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.78■□□□□ 0.92
CALR3Q96L12 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CALR3Q96L12 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CALR3Q96L12 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CALR3Q96L12 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CALR3Q96L12 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.78■□□□□ 0.92
CALR3Q96L12 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.78■□□□□ 0.92
CALR3Q96L12 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.78■□□□□ 0.92
CALR3Q96L12 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.78■□□□□ 0.92
CALR3Q96L12 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CALR3Q96L12 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.78■□□□□ 0.92
CALR3Q96L12 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CALR3Q96L12 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.77■□□□□ 0.92
CALR3Q96L12 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CALR3Q96L12 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.77■□□□□ 0.92
CALR3Q96L12 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CALR3Q96L12 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
CALR3Q96L12 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CALR3Q96L12 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.77■□□□□ 0.92
CALR3Q96L12 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.77■□□□□ 0.92
CALR3Q96L12 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.77■□□□□ 0.92
CALR3Q96L12 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CALR3Q96L12 AC093503.3-201ENST00000624917 2352 ntBASIC20.77■□□□□ 0.91
CALR3Q96L12 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.76■□□□□ 0.91
CALR3Q96L12 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CALR3Q96L12 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.76■□□□□ 0.91
CALR3Q96L12 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CALR3Q96L12 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CALR3Q96L12 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CALR3Q96L12 AL355472.2-201ENST00000422958 438 ntBASIC20.76■□□□□ 0.91
CALR3Q96L12 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.76■□□□□ 0.91
CALR3Q96L12 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 LINC01465-201ENST00000408887 1940 ntBASIC20.76■□□□□ 0.91
CALR3Q96L12 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CALR3Q96L12 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CALR3Q96L12 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CALR3Q96L12 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.75■□□□□ 0.91
CALR3Q96L12 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.75■□□□□ 0.91
CALR3Q96L12 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CALR3Q96L12 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.75■□□□□ 0.91
CALR3Q96L12 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CALR3Q96L12 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CALR3Q96L12 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.74■□□□□ 0.91
CALR3Q96L12 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CALR3Q96L12 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms