Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 AC011484.1-201ENST00000377652 1995 ntBASIC20.86■□□□□ 0.93
RNF135Q8IUD6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF135Q8IUD6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 AC027702.1-201ENST00000563810 1770 ntBASIC20.85■□□□□ 0.93
RNF135Q8IUD6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF135Q8IUD6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 AK4P3-201ENST00000418260 669 ntBASIC20.84■□□□□ 0.93
RNF135Q8IUD6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 AC022616.7-201ENST00000525383 220 ntBASIC20.84■□□□□ 0.93
RNF135Q8IUD6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 LINC01238-205ENST00000567549 1107 ntBASIC20.84■□□□□ 0.93
RNF135Q8IUD6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF135Q8IUD6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 CRYGFP-201ENST00000418459 633 ntBASIC20.83■□□□□ 0.93
RNF135Q8IUD6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 KRT18P48-201ENST00000434763 852 ntBASIC20.83■□□□□ 0.93
RNF135Q8IUD6 KSR1P1-201ENST00000446298 240 ntBASIC20.83■□□□□ 0.93
RNF135Q8IUD6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF135Q8IUD6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF135Q8IUD6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF135Q8IUD6 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF135Q8IUD6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 AC026396.1-201ENST00000419388 421 ntBASIC20.82■□□□□ 0.92
RNF135Q8IUD6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF135Q8IUD6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF135Q8IUD6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms