Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 ZFYVE27-207ENST00000423811 3045 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.583e-8■□□□□ 9
PABPN1Q86U42 ZFYVE27-206ENST00000393677 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.543e-8■□□□□ 9
PABPN1Q86U42 SLC26A6-215ENST00000466257 706 ntTSL 317.55■□□□□ 0.43e-8■□□□□ 9
PABPN1Q86U42 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.367e-18■□□□□ 9
PABPN1Q86U42 MST1-206ENST00000481055 597 ntTSL 524.36■■□□□ 1.492e-23■□□□□ 9
PABPN1Q86U42 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC28.41■■■□□ 2.141e-6■□□□□ 9
PABPN1Q86U42 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.341e-6■□□□□ 9
PABPN1Q86U42 EXOSC10-207ENST00000474216 2007 ntTSL 221.71■■□□□ 1.076e-8■□□□□ 9
PABPN1Q86U42 EXOSC10-204ENST00000469634 2361 ntTSL 421.45■■□□□ 1.026e-8■□□□□ 9
PABPN1Q86U42 EXOSC10-202ENST00000376936 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.596e-8■□□□□ 9
PABPN1Q86U42 EXOSC10-201ENST00000304457 2721 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.456e-8■□□□□ 9
PABPN1Q86U42 EXOSC10-208ENST00000478271 608 ntTSL 213.07□□□□□ -0.326e-8■□□□□ 9
PABPN1Q86U42 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)33.68■■■□□ 2.987e-6■□□□□ 8.9
PABPN1Q86U42 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.077e-6■□□□□ 8.9
PABPN1Q86U42 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.557e-6■□□□□ 8.9
PABPN1Q86U42 TMEM94-206ENST00000577380 554 ntTSL 449.64■■■■■ 5.545e-6■□□□□ 8.9
PABPN1Q86U42 TMEM94-224ENST00000582186 565 ntTSL 443.12■■■■■ 4.495e-6■□□□□ 8.9
PABPN1Q86U42 ENTPD6-207ENST00000425813 945 ntTSL 539.79■■■■□ 3.965e-6■□□□□ 8.9
PABPN1Q86U42 TMEM94-225ENST00000582455 564 ntTSL 433.99■■■■□ 3.035e-6■□□□□ 8.9
PABPN1Q86U42 TMEM94-233ENST00000585277 581 ntTSL 331.39■■■□□ 2.625e-6■□□□□ 8.9
PABPN1Q86U42 TMEM94-222ENST00000581834 484 ntTSL 329.98■■■□□ 2.395e-6■□□□□ 8.9
PABPN1Q86U42 TBC1D17-206ENST00000598789 556 ntTSL 429.98■■■□□ 2.395e-6■□□□□ 8.9
PABPN1Q86U42 MINK1-212ENST00000576037 770 ntTSL 228.03■■■□□ 2.085e-6■□□□□ 8.9
PABPN1Q86U42 EPS8L3-209ENST00000494151 630 ntTSL 227.7■■■□□ 2.025e-6■□□□□ 8.9
PABPN1Q86U42 EPS8L3-204ENST00000472325 1806 ntTSL 1 (best)26.8■■□□□ 1.885e-6■□□□□ 8.9
PABPN1Q86U42 IFT172-209ENST00000475909 402 ntTSL 526.72■■□□□ 1.875e-6■□□□□ 8.9
PABPN1Q86U42 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.835e-6■□□□□ 8.9
PABPN1Q86U42 ATF6B-216ENST00000494022 320 ntTSL 225.77■■□□□ 1.725e-6■□□□□ 8.9
PABPN1Q86U42 TMEM94-213ENST00000580416 430 ntTSL 425.46■■□□□ 1.675e-6■□□□□ 8.9
PABPN1Q86U42 TMEM94-218ENST00000581252 522 ntTSL 525.41■■□□□ 1.665e-6■□□□□ 8.9
PABPN1Q86U42 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.455e-6■□□□□ 8.9
PABPN1Q86U42 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.395e-6■□□□□ 8.9
PABPN1Q86U42 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC23.26■■□□□ 1.315e-6■□□□□ 8.9
PABPN1Q86U42 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.225e-6■□□□□ 8.9
PABPN1Q86U42 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.135e-6■□□□□ 8.9
PABPN1Q86U42 SRC-202ENST00000373558 4304 ntTSL 5 BASIC20.8■□□□□ 0.928e-14■□□□□ 8.9
PABPN1Q86U42 INTS3-208ENST00000491790 2116 ntTSL 220.41■□□□□ 0.865e-6■□□□□ 8.9
PABPN1Q86U42 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.795e-6■□□□□ 8.9
PABPN1Q86U42 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.638e-14■□□□□ 8.9
PABPN1Q86U42 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.578e-14■□□□□ 8.9
PABPN1Q86U42 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.498e-14■□□□□ 8.9
PABPN1Q86U42 SRC-207ENST00000477066 3300 ntTSL 217.99■□□□□ 0.478e-14■□□□□ 8.9
PABPN1Q86U42 INTS3-206ENST00000480659 866 ntTSL 416.76■□□□□ 0.275e-6■□□□□ 8.9
PABPN1Q86U42 SEMA4G-202ENST00000370250 3596 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.275e-6■□□□□ 8.9
PABPN1Q86U42 CHKB-205ENST00000468532 1052 ntTSL 562.59■■■■■ 7.612e-6■□□□□ 8.9
PABPN1Q86U42 CPNE1-228ENST00000498814 550 ntTSL 330.17■■■□□ 2.426e-8■□□□□ 8.9
PABPN1Q86U42 CPNE1-209ENST00000415920 731 ntTSL 527.91■■■□□ 2.066e-8■□□□□ 8.9
PABPN1Q86U42 CPNE1-222ENST00000473373 821 ntTSL 223.41■■□□□ 1.346e-8■□□□□ 8.9
PABPN1Q86U42 CPNE1-221ENST00000462352 625 ntTSL 222.66■■□□□ 1.226e-8■□□□□ 8.9
PABPN1Q86U42 FDPS-207ENST00000468479 938 ntTSL 225.8■■□□□ 1.724e-8■□□□□ 8.9
PABPN1Q86U42 CHKB-207ENST00000476289 1010 ntTSL 565.59■■■■■ 8.093e-7■□□□□ 8.9
PABPN1Q86U42 CPSF1-214ENST00000622776 1029 ntTSL 550.09■■■■■ 5.618e-6■□□□□ 8.9
PABPN1Q86U42 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC48.19■■■■■ 5.38e-6■□□□□ 8.9
PABPN1Q86U42 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC48.19■■■■■ 5.38e-6■□□□□ 8.9
PABPN1Q86U42 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC48.19■■■■■ 5.38e-6■□□□□ 8.9
PABPN1Q86U42 RING1-202ENST00000478431 1532 ntTSL 1 (best)46.18■■■■■ 4.983e-7■□□□□ 8.9
PABPN1Q86U42 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC45.93■■■■■ 4.948e-6■□□□□ 8.9
PABPN1Q86U42 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC45.82■■■■■ 4.938e-6■□□□□ 8.9
PABPN1Q86U42 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC44.11■■■■■ 4.658e-6■□□□□ 8.9
PABPN1Q86U42 PDXDC1-207ENST00000562119 884 ntTSL 543.74■■■■■ 4.598e-6■□□□□ 8.9
PABPN1Q86U42 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC43.26■■■■■ 4.528e-6■□□□□ 8.9
PABPN1Q86U42 AL807752.6-201ENST00000625047 746 ntAPPRIS ALT2 TSL 343.23■■■■■ 4.518e-6■□□□□ 8.9
PABPN1Q86U42 SLC25A1-205ENST00000470922 1598 ntTSL 243.12■■■■■ 4.498e-6■□□□□ 8.9
PABPN1Q86U42 FAM136A-204ENST00000450256 936 ntTSL 243■■■■■ 4.478e-6■□□□□ 8.9
PABPN1Q86U42 FBXW5-206ENST00000483559 2392 ntTSL 242.41■■■■■ 4.388e-6■□□□□ 8.9
PABPN1Q86U42 FAM136A-203ENST00000438759 518 ntTSL 341.88■■■■■ 4.298e-6■□□□□ 8.9
PABPN1Q86U42 BDH1-209ENST00000446746 868 ntTSL 341.71■■■■■ 4.273e-7■□□□□ 8.9
PABPN1Q86U42 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC41.06■■■■■ 4.168e-6■□□□□ 8.9
PABPN1Q86U42 FBXW5-204ENST00000459905 2339 ntTSL 241.02■■■■■ 4.168e-6■□□□□ 8.9
PABPN1Q86U42 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC40.81■■■■■ 4.123e-7■□□□□ 8.9
PABPN1Q86U42 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC40.53■■■■■ 4.088e-6■□□□□ 8.9
PABPN1Q86U42 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.063e-7■□□□□ 8.9
PABPN1Q86U42 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC40.3■■■■■ 4.048e-6■□□□□ 8.9
PABPN1Q86U42 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC39.9■■■■□ 3.988e-6■□□□□ 8.9
PABPN1Q86U42 CTSA-206ENST00000480961 513 ntTSL 239.77■■■■□ 3.968e-6■□□□□ 8.9
PABPN1Q86U42 PVRIG2P-201ENST00000435460 978 ntBASIC38.15■■■■□ 3.73e-7■□□□□ 8.9
PABPN1Q86U42 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC38.07■■■■□ 3.688e-6■□□□□ 8.9
PABPN1Q86U42 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC37.66■■■■□ 3.628e-6■□□□□ 8.9
PABPN1Q86U42 TCF3-206ENST00000585855 1170 ntTSL 337.5■■■■□ 3.593e-7■□□□□ 8.9
PABPN1Q86U42 TCF3-213ENST00000590436 1149 ntTSL 537.5■■■■□ 3.593e-7■□□□□ 8.9
PABPN1Q86U42 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC36.96■■■■□ 3.518e-6■□□□□ 8.9
PABPN1Q86U42 TCF3-216ENST00000592395 996 ntTSL 536.59■■■■□ 3.453e-7■□□□□ 8.9
PABPN1Q86U42 TCF3-207ENST00000586164 409 ntTSL 336.2■■■■□ 3.393e-7■□□□□ 8.9
PABPN1Q86U42 CDK16-217ENST00000522234 1679 ntTSL 236.03■■■■□ 3.368e-6■□□□□ 8.9
PABPN1Q86U42 NPDC1-206ENST00000496498 383 ntTSL 235.54■■■■□ 3.288e-6■□□□□ 8.9
PABPN1Q86U42 FBXW5-207ENST00000487794 1932 ntTSL 1 (best)35.44■■■■□ 3.268e-6■□□□□ 8.9
PABPN1Q86U42 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC34.91■■■■□ 3.188e-6■□□□□ 8.9
PABPN1Q86U42 NCLN-207ENST00000592235 380 ntTSL 534.89■■■■□ 3.188e-6■□□□□ 8.9
PABPN1Q86U42 CHKB-202ENST00000463053 886 ntTSL 334.58■■■■□ 3.133e-7■□□□□ 8.9
PABPN1Q86U42 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC34.06■■■■□ 3.048e-6■□□□□ 8.9
PABPN1Q86U42 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC33.62■■■□□ 2.978e-6■□□□□ 8.9
PABPN1Q86U42 NCLN-203ENST00000587740 1210 ntTSL 1 (best)33.49■■■□□ 2.958e-6■□□□□ 8.9
PABPN1Q86U42 ENO2-207ENST00000537688 547 ntTSL 533.34■■■□□ 2.933e-7■□□□□ 8.9
PABPN1Q86U42 TCF3-215ENST00000590684 1313 ntTSL 333.19■■■□□ 2.93e-7■□□□□ 8.9
PABPN1Q86U42 ENO2-210ENST00000539713 543 ntTSL 432.76■■■□□ 2.833e-7■□□□□ 8.9
PABPN1Q86U42 NCLN-202ENST00000586904 836 ntTSL 532.73■■■□□ 2.838e-6■□□□□ 8.9
PABPN1Q86U42 TCF3-211ENST00000587425 629 ntTSL 231.88■■■□□ 2.693e-7■□□□□ 8.9
PABPN1Q86U42 NT5DC2-213ENST00000489316 772 ntTSL 531.52■■■□□ 2.648e-6■□□□□ 8.9
PABPN1Q86U42 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.68e-6■□□□□ 8.9
PABPN1Q86U42 TKT-204ENST00000450814 1941 ntTSL 231.12■■■□□ 2.578e-6■□□□□ 8.9
Retrieved 100 of 8,254 protein–RNA pairs in 211.9 ms