RNA–Protein interactions for RNA: ENST00000587425.5

TCF3-211, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-211ENST00000587425 NISCHQ9Y2I1 1504 aa38.12■■■■□ 3.69
TCF3-211ENST00000587425 ABCC9O60706 1549 aa34.2■■■■□ 3.06
TCF3-211ENST00000587425 CCDC180Q9P1Z9 1646 aa34.13■■■■□ 3.05
TCF3-211ENST00000587425 RB1CC1Q8TDY2 1594 aa32.47■■■□□ 2.79
TCF3-211ENST00000587425 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
TCF3-211ENST00000587425 NACADO15069 1562 aa32.24■■■□□ 2.75
TCF3-211ENST00000587425 DNAJC5BQ9UF47 199 aa32.01■■■□□ 2.71
TCF3-211ENST00000587425 PABPN1Q86U42 306 aaKnown RBP eCLIP31.88■■■□□ 2.693e-7■□□□□ 8.9
TCF3-211ENST00000587425 UNC13AQ9UPW8 1703 aa31.83■■■□□ 2.69
TCF3-211ENST00000587425 MYO15BQ96JP2 1530 aa31.74■■■□□ 2.67
TCF3-211ENST00000587425 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
TCF3-211ENST00000587425 BICRAQ9NZM4 1560 aa31.57■■■□□ 2.64
TCF3-211ENST00000587425 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.62
TCF3-211ENST00000587425 SCRIBQ14160 1630 aa31.25■■■□□ 2.59
TCF3-211ENST00000587425 SHROOM4Q9ULL8 1493 aa30.99■■■□□ 2.55
TCF3-211ENST00000587425 CC2D2AQ9P2K1 1620 aa30.85■■■□□ 2.53
TCF3-211ENST00000587425 EIF4G1Q04637 1599 aaKnown RBP30.78■■■□□ 2.52
TCF3-211ENST00000587425 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
TCF3-211ENST00000587425 NCAPD3P42695 1498 aa29.75■■■□□ 2.35
TCF3-211ENST00000587425 SMARCA4P51532 1647 aa29.74■■■□□ 2.35
TCF3-211ENST00000587425 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
TCF3-211ENST00000587425 SMARCA2P51531 1590 aa29.61■■■□□ 2.33
TCF3-211ENST00000587425 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
TCF3-211ENST00000587425 HMGXB3Q12766 1538 aa29.55■■■□□ 2.32
TCF3-211ENST00000587425 ERCC6Q03468 1493 aa29.48■■■□□ 2.31
TCF3-211ENST00000587425 BAZ1BQ9UIG0 1483 aaKnown RBP29.47■■■□□ 2.31
TCF3-211ENST00000587425 MROH2BQ7Z745 1585 aa29.43■■■□□ 2.3
TCF3-211ENST00000587425 NESP48681 1621 aa29.41■■■□□ 2.3
TCF3-211ENST00000587425 PEG3Q9GZU2 1588 aa29.37■■■□□ 2.29
TCF3-211ENST00000587425 CUX2O14529 1486 aa29.3■■■□□ 2.28
TCF3-211ENST00000587425 DNAJC5Q9H3Z4 198 aa29.23■■■□□ 2.27
TCF3-211ENST00000587425 WIZO95785 1651 aa29.11■■■□□ 2.25
TCF3-211ENST00000587425 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
TCF3-211ENST00000587425 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
TCF3-211ENST00000587425 KIF21AQ7Z4S6 1674 aa29.02■■■□□ 2.24
TCF3-211ENST00000587425 PDS5BQ9NTI5 1447 aa28.92■■■□□ 2.22
TCF3-211ENST00000587425 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
TCF3-211ENST00000587425 RSF1Q96T23 1441 aaPredicted RBP28.82■■■□□ 2.2
TCF3-211ENST00000587425 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
TCF3-211ENST00000587425 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
TCF3-211ENST00000587425 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
TCF3-211ENST00000587425 WDR62O43379 1518 aa28.62■■■□□ 2.17
TCF3-211ENST00000587425 FANCD2Q9BXW9 1451 aa28.6■■■□□ 2.17
TCF3-211ENST00000587425 CFTRP13569 1480 aa28.57■■■□□ 2.16
TCF3-211ENST00000587425 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
TCF3-211ENST00000587425 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.13
TCF3-211ENST00000587425 PRDM2Q13029 1718 aa28.32■■■□□ 2.12
TCF3-211ENST00000587425 TRIM41Q8WV44 630 aa28.12■■■□□ 2.09
TCF3-211ENST00000587425 TOPBP1Q92547 1522 aa28.08■■■□□ 2.08
TCF3-211ENST00000587425 ZNF608Q9ULD9 1512 aaPredicted RBP28.06■■■□□ 2.08
TCF3-211ENST00000587425 OSCARQ8IYS5 282 aa28.01■■■□□ 2.07
TCF3-211ENST00000587425 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
TCF3-211ENST00000587425 DNMBPQ6XZF7 1577 aa27.96■■■□□ 2.07
TCF3-211ENST00000587425 ABCC8Q09428 1581 aa27.91■■■□□ 2.06
TCF3-211ENST00000587425 EIF4G3O43432 1585 aaKnown RBP27.88■■■□□ 2.05
TCF3-211ENST00000587425 TARBP1Q13395 1621 aaKnown RBP27.81■■■□□ 2.04
TCF3-211ENST00000587425 AQRO60306 1485 aaKnown RBP eCLIP27.8■■■□□ 2.043e-8■■■■□ 23.3
TCF3-211ENST00000587425 POLA1P09884 1462 aaPredicted RBP27.79■■■□□ 2.04
TCF3-211ENST00000587425 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
TCF3-211ENST00000587425 SUPT5HO00267 1087 aaKnown RBP27.71■■■□□ 2.03
TCF3-211ENST00000587425 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.03
TCF3-211ENST00000587425 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.03
TCF3-211ENST00000587425 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.03
TCF3-211ENST00000587425 CHD1O14646 1710 aa27.68■■■□□ 2.02
TCF3-211ENST00000587425 SOGA1O94964 1423 aa27.66■■■□□ 2.02
TCF3-211ENST00000587425 FGD5Q6ZNL6 1462 aa27.65■■■□□ 2.02
TCF3-211ENST00000587425 CUX1P39880 1505 aa27.65■■■□□ 2.02
TCF3-211ENST00000587425 TDRD9Q8NDG6 1382 aaKnown RBP27.64■■■□□ 2.02
TCF3-211ENST00000587425 FBLN2P98095 1184 aa27.63■■■□□ 2.01
TCF3-211ENST00000587425 ARHGEF11O15085 1522 aa27.61■■■□□ 2.01
TCF3-211ENST00000587425 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
TCF3-211ENST00000587425 CYB5RLQ6IPT4 315 aa27.43■■□□□ 1.98
TCF3-211ENST00000587425 WDR97A6NE52 1622 aa27.42■■□□□ 1.98
TCF3-211ENST00000587425 GRIN2BQ13224 1484 aa27.38■■□□□ 1.97
TCF3-211ENST00000587425 CHMP7Q8WUX9 453 aaPredicted RBP27.37■■□□□ 1.97
TCF3-211ENST00000587425 ARAP1Q96P48 1450 aa27.36■■□□□ 1.97
TCF3-211ENST00000587425 MAGI1Q96QZ7 1491 aaPredicted RBP27.36■■□□□ 1.97
TCF3-211ENST00000587425 PBRM1Q86U86 1689 aa27.34■■□□□ 1.97
TCF3-211ENST00000587425 GAPVD1Q14C86 1478 aa27.32■■□□□ 1.96
TCF3-211ENST00000587425 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
TCF3-211ENST00000587425 ABCA10Q8WWZ4 1543 aa27.28■■□□□ 1.96
TCF3-211ENST00000587425 SYNJ2O15056 1496 aa27.28■■□□□ 1.96
TCF3-211ENST00000587425 SYNJ1O43426 1573 aa27.27■■□□□ 1.96
TCF3-211ENST00000587425 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
TCF3-211ENST00000587425 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
TCF3-211ENST00000587425 BIVM-ERCC5R4GMW8 1640 aa27.19■■□□□ 1.94
TCF3-211ENST00000587425 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
TCF3-211ENST00000587425 TRHP20396 242 aaPredicted RBP27.11■■□□□ 1.93
TCF3-211ENST00000587425 ADAMTS12P58397 1594 aa27.07■■□□□ 1.92
TCF3-211ENST00000587425 GRIN2AQ12879 1464 aa27.06■■□□□ 1.92
TCF3-211ENST00000587425 CEP170Q5SW79 1584 aa26.99■■□□□ 1.91
TCF3-211ENST00000587425 ERCC6L2Q5T890 1561 aa26.98■■□□□ 1.91
TCF3-211ENST00000587425 FHAD1B1AJZ9 1412 aa26.96■■□□□ 1.91
TCF3-211ENST00000587425 NUP160Q12769 1436 aa26.93■■□□□ 1.9
TCF3-211ENST00000587425 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
TCF3-211ENST00000587425 SHROOM2Q13796 1616 aa26.81■■□□□ 1.88
TCF3-211ENST00000587425 PRG4Q92954 1404 aaPredicted RBP26.72■■□□□ 1.87
TCF3-211ENST00000587425 RUSC2Q8N2Y8 1516 aa26.69■■□□□ 1.86
TCF3-211ENST00000587425 JPH4Q96JJ6 628 aa26.68■■□□□ 1.86
TCF3-211ENST00000587425 IGF1RP08069 1367 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms