RNA–Protein interactions for RNA: ENST00000478271.1

EXOSC10-208, Transcript of exosome component 10, humanhuman

TSL 2

Gene EXOSC10, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC10-208ENST00000478271 NISCHQ9Y2I1 1504 aa16.12■□□□□ 0.17
EXOSC10-208ENST00000478271 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
EXOSC10-208ENST00000478271 CHIC1Q5VXU3 224 aa14.98□□□□□ -0.01
EXOSC10-208ENST00000478271 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
EXOSC10-208ENST00000478271 ABCC9O60706 1549 aa13.92□□□□□ -0.18
EXOSC10-208ENST00000478271 DCAF8L2P0C7V8 631 aa13.46□□□□□ -0.25
EXOSC10-208ENST00000478271 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
EXOSC10-208ENST00000478271 NACADO15069 1562 aa13.38□□□□□ -0.27
EXOSC10-208ENST00000478271 RB1CC1Q8TDY2 1594 aa13.37□□□□□ -0.27
EXOSC10-208ENST00000478271 MYO15BQ96JP2 1530 aa13.34□□□□□ -0.27
EXOSC10-208ENST00000478271 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
EXOSC10-208ENST00000478271 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
EXOSC10-208ENST00000478271 SENP3Q9H4L4 574 aaPredicted RBP13.11□□□□□ -0.31
EXOSC10-208ENST00000478271 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.326e-8■□□□□ 9
EXOSC10-208ENST00000478271 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
EXOSC10-208ENST00000478271 BICRAQ9NZM4 1560 aa13.03□□□□□ -0.32
EXOSC10-208ENST00000478271 SCRIBQ14160 1630 aa13.02□□□□□ -0.32
EXOSC10-208ENST00000478271 SHROOM4Q9ULL8 1493 aa12.82□□□□□ -0.36
EXOSC10-208ENST00000478271 POTEDQ86YR6 584 aa12.81□□□□□ -0.36
EXOSC10-208ENST00000478271 DNAJC5BQ9UF47 199 aa12.8□□□□□ -0.36
EXOSC10-208ENST00000478271 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
EXOSC10-208ENST00000478271 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
EXOSC10-208ENST00000478271 CC2D2AQ9P2K1 1620 aa12.58□□□□□ -0.4
EXOSC10-208ENST00000478271 SMARCA4P51532 1647 aa12.47□□□□□ -0.41
EXOSC10-208ENST00000478271 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
EXOSC10-208ENST00000478271 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
EXOSC10-208ENST00000478271 ATAD2BQ9ULI0 1458 aa12.42□□□□□ -0.42
EXOSC10-208ENST00000478271 FOXD1Q16676 465 aa12.42□□□□□ -0.42
EXOSC10-208ENST00000478271 NCAPD3P42695 1498 aa12.4□□□□□ -0.43
EXOSC10-208ENST00000478271 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
EXOSC10-208ENST00000478271 RSF1Q96T23 1441 aaPredicted RBP12.35□□□□□ -0.43
EXOSC10-208ENST00000478271 SMARCA2P51531 1590 aa12.35□□□□□ -0.43
EXOSC10-208ENST00000478271 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
EXOSC10-208ENST00000478271 WIZO95785 1651 aa12.29□□□□□ -0.44
EXOSC10-208ENST00000478271 BAZ1BQ9UIG0 1483 aaKnown RBP12.28□□□□□ -0.44
EXOSC10-208ENST00000478271 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
EXOSC10-208ENST00000478271 NESP48681 1621 aa12.09□□□□□ -0.47
EXOSC10-208ENST00000478271 SUPT5HO00267 1087 aaKnown RBP12.09□□□□□ -0.47
EXOSC10-208ENST00000478271 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
EXOSC10-208ENST00000478271 CADPSQ9ULU8 1353 aa12.05□□□□□ -0.48
EXOSC10-208ENST00000478271 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
EXOSC10-208ENST00000478271 CFTRP13569 1480 aa11.98□□□□□ -0.49
EXOSC10-208ENST00000478271 ERCC6Q03468 1493 aa11.94□□□□□ -0.5
EXOSC10-208ENST00000478271 PDS5BQ9NTI5 1447 aa11.94□□□□□ -0.5
EXOSC10-208ENST00000478271 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
EXOSC10-208ENST00000478271 PPP6R1Q9UPN7 881 aa11.89□□□□□ -0.51
EXOSC10-208ENST00000478271 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
EXOSC10-208ENST00000478271 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
EXOSC10-208ENST00000478271 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
EXOSC10-208ENST00000478271 CEP164Q9UPV0 1460 aa11.83□□□□□ -0.52
EXOSC10-208ENST00000478271 MRC2Q9UBG0 1479 aa11.82□□□□□ -0.52
EXOSC10-208ENST00000478271 ADRA2BP18089 450 aa11.8□□□□□ -0.52
EXOSC10-208ENST00000478271 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
EXOSC10-208ENST00000478271 CUX2O14529 1486 aa11.79□□□□□ -0.52
EXOSC10-208ENST00000478271 URB2Q14146 1524 aaKnown RBP11.78□□□□□ -0.52
EXOSC10-208ENST00000478271 WDR62O43379 1518 aa11.77□□□□□ -0.52
EXOSC10-208ENST00000478271 TOPBP1Q92547 1522 aa11.7□□□□□ -0.54
EXOSC10-208ENST00000478271 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
EXOSC10-208ENST00000478271 ABCC8Q09428 1581 aa11.67□□□□□ -0.54
EXOSC10-208ENST00000478271 CUX1P39880 1505 aa11.66□□□□□ -0.54
EXOSC10-208ENST00000478271 POLA1P09884 1462 aaPredicted RBP11.62□□□□□ -0.55
EXOSC10-208ENST00000478271 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
EXOSC10-208ENST00000478271 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
EXOSC10-208ENST00000478271 RAD54L2Q9Y4B4 1467 aa11.6□□□□□ -0.55
EXOSC10-208ENST00000478271 IFT140Q96RY7 1462 aa11.59□□□□□ -0.55
EXOSC10-208ENST00000478271 ZNF608Q9ULD9 1512 aaPredicted RBP11.59□□□□□ -0.55
EXOSC10-208ENST00000478271 SOGA1O94964 1423 aa11.58□□□□□ -0.56
EXOSC10-208ENST00000478271 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
EXOSC10-208ENST00000478271 TARBP1Q13395 1621 aaKnown RBP11.57□□□□□ -0.56
EXOSC10-208ENST00000478271 TOP2BQ02880 1626 aa11.55□□□□□ -0.56
EXOSC10-208ENST00000478271 BIVM-ERCC5R4GMW8 1640 aa11.53□□□□□ -0.56
EXOSC10-208ENST00000478271 AQRO60306 1485 aaKnown RBP eCLIP11.53□□□□□ -0.569e-10■■■■■ 30.5
EXOSC10-208ENST00000478271 PIAS4Q8N2W9 510 aaPredicted RBP11.53□□□□□ -0.56
EXOSC10-208ENST00000478271 TDRD9Q8NDG6 1382 aaKnown RBP11.53□□□□□ -0.56
EXOSC10-208ENST00000478271 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
EXOSC10-208ENST00000478271 EIF4G3O43432 1585 aaKnown RBP11.48□□□□□ -0.57
EXOSC10-208ENST00000478271 WDR97A6NE52 1622 aa11.46□□□□□ -0.57
EXOSC10-208ENST00000478271 GAPVD1Q14C86 1478 aa11.43□□□□□ -0.58
EXOSC10-208ENST00000478271 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
EXOSC10-208ENST00000478271 GRIN2BQ13224 1484 aa11.4□□□□□ -0.58
EXOSC10-208ENST00000478271 TRIM41Q8WV44 630 aa11.4□□□□□ -0.58
EXOSC10-208ENST00000478271 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
EXOSC10-208ENST00000478271 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
EXOSC10-208ENST00000478271 MSH5O43196 834 aa11.39□□□□□ -0.59
EXOSC10-208ENST00000478271 OSCARQ8IYS5 282 aa11.35□□□□□ -0.59
EXOSC10-208ENST00000478271 IGF1RP08069 1367 aa11.35□□□□□ -0.59
EXOSC10-208ENST00000478271 MAGI1Q96QZ7 1491 aaPredicted RBP11.35□□□□□ -0.59
EXOSC10-208ENST00000478271 PBRM1Q86U86 1689 aa11.35□□□□□ -0.59
EXOSC10-208ENST00000478271 RUSC2Q8N2Y8 1516 aa11.35□□□□□ -0.59
EXOSC10-208ENST00000478271 FBLN2P98095 1184 aa11.34□□□□□ -0.59
EXOSC10-208ENST00000478271 KIF27Q86VH2 1401 aa11.34□□□□□ -0.59
EXOSC10-208ENST00000478271 ERICH3Q5RHP9 1530 aa11.33□□□□□ -0.6
EXOSC10-208ENST00000478271 SYNJ2O15056 1496 aa11.32□□□□□ -0.6
EXOSC10-208ENST00000478271 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
EXOSC10-208ENST00000478271 CHD1O14646 1710 aa11.3□□□□□ -0.6
EXOSC10-208ENST00000478271 ADAMTS12P58397 1594 aa11.3□□□□□ -0.6
EXOSC10-208ENST00000478271 FHAD1B1AJZ9 1412 aa11.3□□□□□ -0.6
EXOSC10-208ENST00000478271 GRIN2AQ12879 1464 aa11.26□□□□□ -0.61
EXOSC10-208ENST00000478271 CARMIL1Q5VZK9 1371 aa11.25□□□□□ -0.61
EXOSC10-208ENST00000478271 NUP160Q12769 1436 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms