RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 NISCHQ9Y2I1 1504 aa47.13■■■■■ 5.14
TCF3-213ENST00000590436 CCDC180Q9P1Z9 1646 aa41.66■■■■■ 4.26
TCF3-213ENST00000590436 ABCC9O60706 1549 aa40.05■■■■■ 4
TCF3-213ENST00000590436 ZCCHC6Q5VYS8 1495 aaKnown RBP39.42■■■■□ 3.9
TCF3-213ENST00000590436 DCAF8L2P0C7V8 631 aa39.07■■■■□ 3.85
TCF3-213ENST00000590436 DCAF1Q9Y4B6 1507 aa39.05■■■■□ 3.84
TCF3-213ENST00000590436 NACADO15069 1562 aa38.99■■■■□ 3.83
TCF3-213ENST00000590436 MYO15BQ96JP2 1530 aa38.97■■■■□ 3.83
TCF3-213ENST00000590436 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
TCF3-213ENST00000590436 SCRIBQ14160 1630 aa38.04■■■■□ 3.68
TCF3-213ENST00000590436 UNC13AQ9UPW8 1703 aa37.98■■■■□ 3.67
TCF3-213ENST00000590436 SHROOM4Q9ULL8 1493 aa37.62■■■■□ 3.61
TCF3-213ENST00000590436 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
TCF3-213ENST00000590436 PABPN1Q86U42 306 aaKnown RBP eCLIP37.5■■■■□ 3.593e-7■□□□□ 8.9
TCF3-213ENST00000590436 CECR2Q9BXF3 1484 aa36.61■■■■□ 3.45
TCF3-213ENST00000590436 EIF4G1Q04637 1599 aaKnown RBP36.59■■■■□ 3.45
TCF3-213ENST00000590436 BAZ1AQ9NRL2 1556 aaPredicted RBP36.52■■■■□ 3.44
TCF3-213ENST00000590436 SMARCA4P51532 1647 aa36.45■■■■□ 3.42
TCF3-213ENST00000590436 MROH2BQ7Z745 1585 aa36.32■■■■□ 3.4
TCF3-213ENST00000590436 CC2D2AQ9P2K1 1620 aa36.26■■■■□ 3.4
TCF3-213ENST00000590436 RSF1Q96T23 1441 aaPredicted RBP36.15■■■■□ 3.38
TCF3-213ENST00000590436 SMARCA2P51531 1590 aa36.08■■■■□ 3.37
TCF3-213ENST00000590436 PEG3Q9GZU2 1588 aa36.08■■■■□ 3.37
TCF3-213ENST00000590436 DNAJC5BQ9UF47 199 aa36.05■■■■□ 3.36
TCF3-213ENST00000590436 ATAD2BQ9ULI0 1458 aa36.05■■■■□ 3.36
TCF3-213ENST00000590436 WIZO95785 1651 aa35.98■■■■□ 3.35
TCF3-213ENST00000590436 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
TCF3-213ENST00000590436 HMGXB3Q12766 1538 aa35.85■■■■□ 3.33
TCF3-213ENST00000590436 BAZ1BQ9UIG0 1483 aaKnown RBP35.82■■■■□ 3.32
TCF3-213ENST00000590436 SUPT5HO00267 1087 aaKnown RBP35.74■■■■□ 3.31
TCF3-213ENST00000590436 TOP2AP11388 1531 aaKnown RBP35.67■■■■□ 3.3
TCF3-213ENST00000590436 CCDC88BA6NC98 1476 aa35.2■■■■□ 3.23
TCF3-213ENST00000590436 CADPSQ9ULU8 1353 aa34.91■■■■□ 3.18
TCF3-213ENST00000590436 LAMC3Q9Y6N6 1575 aa34.91■■■■□ 3.18
TCF3-213ENST00000590436 CFTRP13569 1480 aa34.85■■■■□ 3.17
TCF3-213ENST00000590436 NESP48681 1621 aa34.84■■■■□ 3.17
TCF3-213ENST00000590436 PRDM2Q13029 1718 aa34.73■■■■□ 3.15
TCF3-213ENST00000590436 PDS5BQ9NTI5 1447 aa34.64■■■■□ 3.14
TCF3-213ENST00000590436 FANCD2Q9BXW9 1451 aa34.53■■■■□ 3.12
TCF3-213ENST00000590436 ERCC6Q03468 1493 aa34.5■■■■□ 3.11
TCF3-213ENST00000590436 KIF21AQ7Z4S6 1674 aa34.5■■■■□ 3.11
TCF3-213ENST00000590436 CEP164Q9UPV0 1460 aa34.44■■■■□ 3.1
TCF3-213ENST00000590436 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
TCF3-213ENST00000590436 THOC2Q8NI27 1593 aaKnown RBP34.2■■■■□ 3.07
TCF3-213ENST00000590436 ABCC8Q09428 1581 aa34.13■■■■□ 3.05
TCF3-213ENST00000590436 URB2Q14146 1524 aaKnown RBP34.13■■■■□ 3.05
TCF3-213ENST00000590436 WDR62O43379 1518 aa34.1■■■■□ 3.05
TCF3-213ENST00000590436 WRNQ14191 1432 aaPredicted RBP eCLIP34.1■■■■□ 3.05
TCF3-213ENST00000590436 DNMBPQ6XZF7 1577 aa34.1■■■■□ 3.05
TCF3-213ENST00000590436 TOPBP1Q92547 1522 aa34.05■■■■□ 3.04
TCF3-213ENST00000590436 CUX1P39880 1505 aa34.04■■■■□ 3.04
TCF3-213ENST00000590436 SYNJ1O43426 1573 aa33.97■■■■□ 3.03
TCF3-213ENST00000590436 TOP2BQ02880 1626 aa33.96■■■■□ 3.03
TCF3-213ENST00000590436 BIVM-ERCC5R4GMW8 1640 aa33.96■■■■□ 3.03
TCF3-213ENST00000590436 CUX2O14529 1486 aa33.88■■■■□ 3.01
TCF3-213ENST00000590436 FGD5Q6ZNL6 1462 aa33.83■■■■□ 3.01
TCF3-213ENST00000590436 POLA1P09884 1462 aaPredicted RBP33.81■■■■□ 3
TCF3-213ENST00000590436 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
TCF3-213ENST00000590436 TRIM41Q8WV44 630 aa33.74■■■□□ 2.99
TCF3-213ENST00000590436 IFT140Q96RY7 1462 aa33.69■■■□□ 2.98
TCF3-213ENST00000590436 SOGA1O94964 1423 aa33.68■■■□□ 2.98
TCF3-213ENST00000590436 TARBP1Q13395 1621 aaKnown RBP33.63■■■□□ 2.97
TCF3-213ENST00000590436 RAD54L2Q9Y4B4 1467 aa33.63■■■□□ 2.97
TCF3-213ENST00000590436 WDR97A6NE52 1622 aa33.54■■■□□ 2.96
TCF3-213ENST00000590436 ABCA10Q8WWZ4 1543 aa33.53■■■□□ 2.96
TCF3-213ENST00000590436 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
TCF3-213ENST00000590436 EIF4G3O43432 1585 aaKnown RBP33.38■■■□□ 2.93
TCF3-213ENST00000590436 TDRD9Q8NDG6 1382 aaKnown RBP33.38■■■□□ 2.93
TCF3-213ENST00000590436 ABCA5Q8WWZ7 1642 aa33.36■■■□□ 2.93
TCF3-213ENST00000590436 KIF27Q86VH2 1401 aa33.34■■■□□ 2.93
TCF3-213ENST00000590436 AQRO60306 1485 aaKnown RBP eCLIP33.33■■■□□ 2.937e-7■■■□□ 18.9
TCF3-213ENST00000590436 GAPVD1Q14C86 1478 aa33.31■■■□□ 2.92
TCF3-213ENST00000590436 PBRM1Q86U86 1689 aa33.23■■■□□ 2.91
TCF3-213ENST00000590436 GRIN2BQ13224 1484 aa33.22■■■□□ 2.91
TCF3-213ENST00000590436 EEA1Q15075 1411 aa33.18■■■□□ 2.9
TCF3-213ENST00000590436 RUSC2Q8N2Y8 1516 aa33.18■■■□□ 2.9
TCF3-213ENST00000590436 ERICH3Q5RHP9 1530 aa33.17■■■□□ 2.9
TCF3-213ENST00000590436 MAGI1Q96QZ7 1491 aaPredicted RBP33.08■■■□□ 2.89
TCF3-213ENST00000590436 SNAPC4Q5SXM2 1469 aa33.07■■■□□ 2.88
TCF3-213ENST00000590436 IGF1RP08069 1367 aa33.07■■■□□ 2.88
TCF3-213ENST00000590436 CUL7Q14999 1698 aa33.04■■■□□ 2.88
TCF3-213ENST00000590436 FAM9AQ8IZU1 332 aaPredicted RBP33.01■■■□□ 2.87
TCF3-213ENST00000590436 ADAMTS12P58397 1594 aa33■■■□□ 2.87
TCF3-213ENST00000590436 CSRNP3Q8WYN3 585 aa32.97■■■□□ 2.87
TCF3-213ENST00000590436 FHAD1B1AJZ9 1412 aa32.95■■■□□ 2.87
TCF3-213ENST00000590436 SYNJ2O15056 1496 aa32.93■■■□□ 2.86
TCF3-213ENST00000590436 CARMIL1Q5VZK9 1371 aa32.91■■■□□ 2.86
TCF3-213ENST00000590436 PRXQ9BXM0 1461 aa32.85■■■□□ 2.85
TCF3-213ENST00000590436 CHMP7Q8WUX9 453 aaPredicted RBP32.84■■■□□ 2.85
TCF3-213ENST00000590436 CHD1O14646 1710 aa32.84■■■□□ 2.85
TCF3-213ENST00000590436 RAPGEF2Q9Y4G8 1499 aa32.81■■■□□ 2.84
TCF3-213ENST00000590436 FBLN2P98095 1184 aa32.81■■■□□ 2.84
TCF3-213ENST00000590436 GRIN2AQ12879 1464 aa32.8■■■□□ 2.84
TCF3-213ENST00000590436 KIF21BO75037 1637 aa32.78■■■□□ 2.84
TCF3-213ENST00000590436 GOLGA3Q08378 1498 aa32.63■■■□□ 2.81
TCF3-213ENST00000590436 NUP160Q12769 1436 aa32.6■■■□□ 2.81
TCF3-213ENST00000590436 CEP170Q5SW79 1584 aa32.59■■■□□ 2.81
TCF3-213ENST00000590436 OSCARQ8IYS5 282 aa32.57■■■□□ 2.8
TCF3-213ENST00000590436 CTTNBP2Q8WZ74 1663 aa32.51■■■□□ 2.79
TCF3-213ENST00000590436 EHMT2Q96KQ7 1210 aa32.5■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms