RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 NISCHQ9Y2I1 1504 aa43.9■■■■■ 4.62
NPDC1-206ENST00000496498 CCDC180Q9P1Z9 1646 aa39.16■■■■□ 3.86
NPDC1-206ENST00000496498 ABCC9O60706 1549 aa38.12■■■■□ 3.69
NPDC1-206ENST00000496498 RB1CC1Q8TDY2 1594 aa36.82■■■■□ 3.48
NPDC1-206ENST00000496498 NACADO15069 1562 aa36.78■■■■□ 3.48
NPDC1-206ENST00000496498 MYO15BQ96JP2 1530 aa36.61■■■■□ 3.45
NPDC1-206ENST00000496498 ZCCHC6Q5VYS8 1495 aaKnown RBP36.58■■■■□ 3.45
NPDC1-206ENST00000496498 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
NPDC1-206ENST00000496498 DCAF1Q9Y4B6 1507 aa36.43■■■■□ 3.42
NPDC1-206ENST00000496498 UNC13AQ9UPW8 1703 aa35.94■■■■□ 3.34
NPDC1-206ENST00000496498 BICRAQ9NZM4 1560 aa35.62■■■■□ 3.29
NPDC1-206ENST00000496498 SCRIBQ14160 1630 aa35.57■■■■□ 3.29
NPDC1-206ENST00000496498 PABPN1Q86U42 306 aaKnown RBP eCLIP35.54■■■■□ 3.288e-6■□□□□ 8.9
NPDC1-206ENST00000496498 SHROOM4Q9ULL8 1493 aa35.43■■■■□ 3.26
NPDC1-206ENST00000496498 DNAJC5BQ9UF47 199 aa34.89■■■■□ 3.18
NPDC1-206ENST00000496498 EIF4G1Q04637 1599 aaKnown RBP34.71■■■■□ 3.15
NPDC1-206ENST00000496498 CC2D2AQ9P2K1 1620 aa34.55■■■■□ 3.12
NPDC1-206ENST00000496498 CECR2Q9BXF3 1484 aa34.31■■■■□ 3.08
NPDC1-206ENST00000496498 SMARCA4P51532 1647 aa34.08■■■■□ 3.05
NPDC1-206ENST00000496498 BAZ1AQ9NRL2 1556 aaPredicted RBP34.08■■■■□ 3.05
NPDC1-206ENST00000496498 SMARCA2P51531 1590 aa33.91■■■■□ 3.02
NPDC1-206ENST00000496498 NCAPD3P42695 1498 aa33.89■■■■□ 3.02
NPDC1-206ENST00000496498 ATAD2BQ9ULI0 1458 aa33.87■■■■□ 3.01
NPDC1-206ENST00000496498 PEG3Q9GZU2 1588 aa33.81■■■■□ 3
NPDC1-206ENST00000496498 HMGXB3Q12766 1538 aa33.78■■■■□ 3
NPDC1-206ENST00000496498 MROH2BQ7Z745 1585 aa33.77■■■■□ 3
NPDC1-206ENST00000496498 BAZ1BQ9UIG0 1483 aaKnown RBP33.62■■■□□ 2.97
NPDC1-206ENST00000496498 WIZO95785 1651 aa33.42■■■□□ 2.94
NPDC1-206ENST00000496498 RSF1Q96T23 1441 aaPredicted RBP33.38■■■□□ 2.93
NPDC1-206ENST00000496498 TOP2AP11388 1531 aaKnown RBP33.14■■■□□ 2.9
NPDC1-206ENST00000496498 LAMC3Q9Y6N6 1575 aa33.05■■■□□ 2.88
NPDC1-206ENST00000496498 NESP48681 1621 aa32.96■■■□□ 2.87
NPDC1-206ENST00000496498 ERCC6Q03468 1493 aa32.93■■■□□ 2.86
NPDC1-206ENST00000496498 CADPSQ9ULU8 1353 aa32.87■■■□□ 2.85
NPDC1-206ENST00000496498 PDS5BQ9NTI5 1447 aa32.79■■■□□ 2.84
NPDC1-206ENST00000496498 CFTRP13569 1480 aa32.69■■■□□ 2.82
NPDC1-206ENST00000496498 CCDC88BA6NC98 1476 aa32.67■■■□□ 2.82
NPDC1-206ENST00000496498 CUX2O14529 1486 aa32.67■■■□□ 2.82
NPDC1-206ENST00000496498 KIF21AQ7Z4S6 1674 aa32.66■■■□□ 2.82
NPDC1-206ENST00000496498 THOC2Q8NI27 1593 aaKnown RBP32.59■■■□□ 2.81
NPDC1-206ENST00000496498 PRDM2Q13029 1718 aa32.56■■■□□ 2.8
NPDC1-206ENST00000496498 FANCD2Q9BXW9 1451 aa32.49■■■□□ 2.79
NPDC1-206ENST00000496498 CEP164Q9UPV0 1460 aa32.49■■■□□ 2.79
NPDC1-206ENST00000496498 MRC2Q9UBG0 1479 aa32.44■■■□□ 2.78
NPDC1-206ENST00000496498 SUPT5HO00267 1087 aaKnown RBP32.41■■■□□ 2.78
NPDC1-206ENST00000496498 WDR62O43379 1518 aa32.36■■■□□ 2.77
NPDC1-206ENST00000496498 URB2Q14146 1524 aaKnown RBP32.14■■■□□ 2.74
NPDC1-206ENST00000496498 ABCC8Q09428 1581 aa32.07■■■□□ 2.72
NPDC1-206ENST00000496498 DNMBPQ6XZF7 1577 aa31.98■■■□□ 2.71
NPDC1-206ENST00000496498 TOPBP1Q92547 1522 aa31.98■■■□□ 2.71
NPDC1-206ENST00000496498 IFT140Q96RY7 1462 aa31.82■■■□□ 2.68
NPDC1-206ENST00000496498 CUX1P39880 1505 aa31.7■■■□□ 2.67
NPDC1-206ENST00000496498 POLA1P09884 1462 aaPredicted RBP31.69■■■□□ 2.66
NPDC1-206ENST00000496498 TARBP1Q13395 1621 aaKnown RBP31.64■■■□□ 2.66
NPDC1-206ENST00000496498 FGD5Q6ZNL6 1462 aa31.61■■■□□ 2.65
NPDC1-206ENST00000496498 DNAJC5Q9H3Z4 198 aa31.57■■■□□ 2.64
NPDC1-206ENST00000496498 ZNF608Q9ULD9 1512 aaPredicted RBP31.57■■■□□ 2.64
NPDC1-206ENST00000496498 SOGA1O94964 1423 aa31.55■■■□□ 2.64
NPDC1-206ENST00000496498 EIF4G3O43432 1585 aaKnown RBP31.54■■■□□ 2.64
NPDC1-206ENST00000496498 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
NPDC1-206ENST00000496498 WRNQ14191 1432 aaPredicted RBP eCLIP31.51■■■□□ 2.64
NPDC1-206ENST00000496498 BIVM-ERCC5R4GMW8 1640 aa31.51■■■□□ 2.63
NPDC1-206ENST00000496498 RAD54L2Q9Y4B4 1467 aa31.49■■■□□ 2.63
NPDC1-206ENST00000496498 TOP2BQ02880 1626 aa31.49■■■□□ 2.63
NPDC1-206ENST00000496498 SYNJ1O43426 1573 aa31.42■■■□□ 2.62
NPDC1-206ENST00000496498 AQRO60306 1485 aaKnown RBP eCLIP31.38■■■□□ 2.61
NPDC1-206ENST00000496498 ABCA10Q8WWZ4 1543 aa31.35■■■□□ 2.61
NPDC1-206ENST00000496498 TDRD9Q8NDG6 1382 aaKnown RBP31.31■■■□□ 2.6
NPDC1-206ENST00000496498 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
NPDC1-206ENST00000496498 GRIN2BQ13224 1484 aa31.23■■■□□ 2.59
NPDC1-206ENST00000496498 GAPVD1Q14C86 1478 aa31.21■■■□□ 2.59
NPDC1-206ENST00000496498 OSCARQ8IYS5 282 aa31.21■■■□□ 2.59
NPDC1-206ENST00000496498 PBRM1Q86U86 1689 aa31.19■■■□□ 2.58
NPDC1-206ENST00000496498 MAGI1Q96QZ7 1491 aaPredicted RBP31.19■■■□□ 2.58
NPDC1-206ENST00000496498 SNAPC4Q5SXM2 1469 aa31.15■■■□□ 2.58
NPDC1-206ENST00000496498 CHD1O14646 1710 aa31.14■■■□□ 2.58
NPDC1-206ENST00000496498 SYNJ2O15056 1496 aa31.04■■■□□ 2.56
NPDC1-206ENST00000496498 ERICH3Q5RHP9 1530 aa31.01■■■□□ 2.55
NPDC1-206ENST00000496498 FBLN2P98095 1184 aa30.98■■■□□ 2.55
NPDC1-206ENST00000496498 CHMP7Q8WUX9 453 aaPredicted RBP30.95■■■□□ 2.55
NPDC1-206ENST00000496498 ADAMTS12P58397 1594 aa30.93■■■□□ 2.54
NPDC1-206ENST00000496498 KIF27Q86VH2 1401 aa30.89■■■□□ 2.53
NPDC1-206ENST00000496498 FHAD1B1AJZ9 1412 aa30.87■■■□□ 2.53
NPDC1-206ENST00000496498 GRIN2AQ12879 1464 aa30.82■■■□□ 2.53
NPDC1-206ENST00000496498 CLASP1Q7Z460 1538 aa30.82■■■□□ 2.52
NPDC1-206ENST00000496498 CUL7Q14999 1698 aa30.75■■■□□ 2.51
NPDC1-206ENST00000496498 ARHGEF11O15085 1522 aa30.73■■■□□ 2.51
NPDC1-206ENST00000496498 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
NPDC1-206ENST00000496498 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
NPDC1-206ENST00000496498 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
NPDC1-206ENST00000496498 IGF1RP08069 1367 aa30.69■■■□□ 2.5
NPDC1-206ENST00000496498 TRIM41Q8WV44 630 aa30.69■■■□□ 2.5
NPDC1-206ENST00000496498 NUP160Q12769 1436 aa30.69■■■□□ 2.5
NPDC1-206ENST00000496498 CEP170Q5SW79 1584 aa30.64■■■□□ 2.5
NPDC1-206ENST00000496498 CARMIL1Q5VZK9 1371 aa30.54■■■□□ 2.48
NPDC1-206ENST00000496498 SHROOM2Q13796 1616 aa30.5■■■□□ 2.47
NPDC1-206ENST00000496498 RUSC2Q8N2Y8 1516 aa30.48■■■□□ 2.47
NPDC1-206ENST00000496498 ARAP1Q96P48 1450 aa30.46■■■□□ 2.47
NPDC1-206ENST00000496498 KIAA0586Q9BVV6 1533 aa30.4■■■□□ 2.46
NPDC1-206ENST00000496498 RAPGEF2Q9Y4G8 1499 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 113.7 ms