RNA–Protein interactions for RNA: ENST00000522234.5

CDK16-217, Transcript of cyclin dependent kinase 16, humanhuman

TSL 2

Gene CDK16, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-217ENST00000522234 NISCHQ9Y2I1 1504 aa46.63■■■■■ 5.06
CDK16-217ENST00000522234 CCDC180Q9P1Z9 1646 aa40.64■■■■■ 4.1
CDK16-217ENST00000522234 ZCCHC6Q5VYS8 1495 aaKnown RBP39.22■■■■□ 3.87
CDK16-217ENST00000522234 DCAF1Q9Y4B6 1507 aa38.6■■■■□ 3.77
CDK16-217ENST00000522234 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
CDK16-217ENST00000522234 ABCC9O60706 1549 aa38.21■■■■□ 3.71
CDK16-217ENST00000522234 SHROOM4Q9ULL8 1493 aa38.08■■■■□ 3.69
CDK16-217ENST00000522234 MYO15BQ96JP2 1530 aa38.08■■■■□ 3.69
CDK16-217ENST00000522234 NACADO15069 1562 aa37.79■■■■□ 3.64
CDK16-217ENST00000522234 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
CDK16-217ENST00000522234 SCRIBQ14160 1630 aa37.35■■■■□ 3.57
CDK16-217ENST00000522234 SUPT5HO00267 1087 aaKnown RBP36.72■■■■□ 3.47
CDK16-217ENST00000522234 UNC13AQ9UPW8 1703 aa36.67■■■■□ 3.46
CDK16-217ENST00000522234 BICRAQ9NZM4 1560 aa36.28■■■■□ 3.4
CDK16-217ENST00000522234 RSF1Q96T23 1441 aaPredicted RBP36.22■■■■□ 3.39
CDK16-217ENST00000522234 CECR2Q9BXF3 1484 aa36.19■■■■□ 3.38
CDK16-217ENST00000522234 PABPN1Q86U42 306 aaKnown RBP eCLIP36.03■■■■□ 3.368e-6■□□□□ 8.9
CDK16-217ENST00000522234 MROH2BQ7Z745 1585 aa36.02■■■■□ 3.36
CDK16-217ENST00000522234 BAZ1AQ9NRL2 1556 aaPredicted RBP36.01■■■■□ 3.36
CDK16-217ENST00000522234 SMARCA4P51532 1647 aa35.83■■■■□ 3.33
CDK16-217ENST00000522234 WIZO95785 1651 aa35.73■■■■□ 3.31
CDK16-217ENST00000522234 TOP2AP11388 1531 aaKnown RBP35.4■■■■□ 3.26
CDK16-217ENST00000522234 PEG3Q9GZU2 1588 aa35.39■■■■□ 3.26
CDK16-217ENST00000522234 CHIC1Q5VXU3 224 aa35.25■■■■□ 3.23
CDK16-217ENST00000522234 SMARCA2P51531 1590 aa35.2■■■■□ 3.23
CDK16-217ENST00000522234 ATAD2BQ9ULI0 1458 aa35.18■■■■□ 3.22
CDK16-217ENST00000522234 EIF4G1Q04637 1599 aaKnown RBP35.17■■■■□ 3.22
CDK16-217ENST00000522234 CCDC88BA6NC98 1476 aa35.01■■■■□ 3.2
CDK16-217ENST00000522234 BAZ1BQ9UIG0 1483 aaKnown RBP35■■■■□ 3.19
CDK16-217ENST00000522234 NCAPD3P42695 1498 aa34.85■■■■□ 3.17
CDK16-217ENST00000522234 HMGXB3Q12766 1538 aa34.85■■■■□ 3.17
CDK16-217ENST00000522234 CC2D2AQ9P2K1 1620 aa34.6■■■■□ 3.13
CDK16-217ENST00000522234 TRIM41Q8WV44 630 aa34.54■■■■□ 3.12
CDK16-217ENST00000522234 ABCC8Q09428 1581 aa34.32■■■■□ 3.08
CDK16-217ENST00000522234 CFTRP13569 1480 aa34.13■■■■□ 3.05
CDK16-217ENST00000522234 WRNQ14191 1432 aaPredicted RBP eCLIP34.1■■■■□ 3.05
CDK16-217ENST00000522234 PRDM2Q13029 1718 aa34.01■■■■□ 3.04
CDK16-217ENST00000522234 SYNJ1O43426 1573 aa33.96■■■■□ 3.03
CDK16-217ENST00000522234 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
CDK16-217ENST00000522234 FAM9AQ8IZU1 332 aaPredicted RBP33.88■■■■□ 3.01
CDK16-217ENST00000522234 LOC105371045A0A1W2PR82 267 aa33.87■■■■□ 3.01
CDK16-217ENST00000522234 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
CDK16-217ENST00000522234 BIVM-ERCC5R4GMW8 1640 aa33.8■■■■□ 3
CDK16-217ENST00000522234 EEA1Q15075 1411 aa33.73■■■□□ 2.99
CDK16-217ENST00000522234 SOGA1O94964 1423 aa33.7■■■□□ 2.99
CDK16-217ENST00000522234 CUX1P39880 1505 aa33.68■■■□□ 2.98
CDK16-217ENST00000522234 LAMC3Q9Y6N6 1575 aa33.66■■■□□ 2.98
CDK16-217ENST00000522234 FANCD2Q9BXW9 1451 aa33.6■■■□□ 2.97
CDK16-217ENST00000522234 DNAJC5BQ9UF47 199 aa33.59■■■□□ 2.97
CDK16-217ENST00000522234 NESP48681 1621 aa33.59■■■□□ 2.97
CDK16-217ENST00000522234 RUSC2Q8N2Y8 1516 aa33.55■■■□□ 2.96
CDK16-217ENST00000522234 CSRNP3Q8WYN3 585 aa33.46■■■□□ 2.95
CDK16-217ENST00000522234 PDS5BQ9NTI5 1447 aa33.39■■■□□ 2.94
CDK16-217ENST00000522234 CEP164Q9UPV0 1460 aa33.39■■■□□ 2.94
CDK16-217ENST00000522234 EHMT2Q96KQ7 1210 aa33.36■■■□□ 2.93
CDK16-217ENST00000522234 DNMBPQ6XZF7 1577 aa33.36■■■□□ 2.93
CDK16-217ENST00000522234 FGD5Q6ZNL6 1462 aa33.29■■■□□ 2.92
CDK16-217ENST00000522234 KIF21BO75037 1637 aa33.28■■■□□ 2.92
CDK16-217ENST00000522234 GOLGA3Q08378 1498 aa33.26■■■□□ 2.92
CDK16-217ENST00000522234 TOPBP1Q92547 1522 aa33.25■■■□□ 2.91
CDK16-217ENST00000522234 KIF27Q86VH2 1401 aa33.24■■■□□ 2.91
CDK16-217ENST00000522234 KIF21AQ7Z4S6 1674 aa33.23■■■□□ 2.91
CDK16-217ENST00000522234 URB2Q14146 1524 aaKnown RBP33.17■■■□□ 2.9
CDK16-217ENST00000522234 TNIKQ9UKE5 1360 aa33.17■■■□□ 2.9
CDK16-217ENST00000522234 POLA1P09884 1462 aaPredicted RBP33.11■■■□□ 2.89
CDK16-217ENST00000522234 CUX2O14529 1486 aa33.1■■■□□ 2.89
CDK16-217ENST00000522234 PRXQ9BXM0 1461 aa33.04■■■□□ 2.88
CDK16-217ENST00000522234 UBTFP17480 764 aaKnown RBP33.04■■■□□ 2.88
CDK16-217ENST00000522234 ERICH3Q5RHP9 1530 aa33.04■■■□□ 2.88
CDK16-217ENST00000522234 RAPGEF2Q9Y4G8 1499 aa33.02■■■□□ 2.88
CDK16-217ENST00000522234 ABCA10Q8WWZ4 1543 aa33.01■■■□□ 2.87
CDK16-217ENST00000522234 CEP162Q5TB80 1403 aa33■■■□□ 2.87
CDK16-217ENST00000522234 RAD54L2Q9Y4B4 1467 aa32.97■■■□□ 2.87
CDK16-217ENST00000522234 MRC2Q9UBG0 1479 aa32.96■■■□□ 2.87
CDK16-217ENST00000522234 WDR97A6NE52 1622 aa32.91■■■□□ 2.86
CDK16-217ENST00000522234 IGF1RP08069 1367 aa32.89■■■□□ 2.86
CDK16-217ENST00000522234 WDR62O43379 1518 aa32.79■■■□□ 2.84
CDK16-217ENST00000522234 ERCC6Q03468 1493 aa32.77■■■□□ 2.84
CDK16-217ENST00000522234 TARBP1Q13395 1621 aaKnown RBP32.76■■■□□ 2.83
CDK16-217ENST00000522234 ABCA5Q8WWZ7 1642 aa32.74■■■□□ 2.83
CDK16-217ENST00000522234 CARMIL1Q5VZK9 1371 aa32.74■■■□□ 2.83
CDK16-217ENST00000522234 CLIP1P30622 1438 aa32.71■■■□□ 2.83
CDK16-217ENST00000522234 CUL7Q14999 1698 aa32.69■■■□□ 2.82
CDK16-217ENST00000522234 THOC2Q8NI27 1593 aaKnown RBP32.65■■■□□ 2.82
CDK16-217ENST00000522234 GAPVD1Q14C86 1478 aa32.64■■■□□ 2.82
CDK16-217ENST00000522234 TDRD9Q8NDG6 1382 aaKnown RBP32.62■■■□□ 2.81
CDK16-217ENST00000522234 IFT140Q96RY7 1462 aa32.58■■■□□ 2.81
CDK16-217ENST00000522234 TRIM26Q12899 539 aaPredicted RBP32.51■■■□□ 2.79
CDK16-217ENST00000522234 PCGF6Q9BYE7 350 aa32.5■■■□□ 2.79
CDK16-217ENST00000522234 PBRM1Q86U86 1689 aa32.47■■■□□ 2.79
CDK16-217ENST00000522234 VPS8Q8N3P4 1428 aa32.46■■■□□ 2.79
CDK16-217ENST00000522234 RANGAP1P46060 587 aaPredicted RBP32.42■■■□□ 2.78
CDK16-217ENST00000522234 AQRO60306 1485 aaKnown RBP eCLIP32.4■■■□□ 2.783e-7■■■■■ 33.1
CDK16-217ENST00000522234 GRIN2BQ13224 1484 aa32.37■■■□□ 2.77
CDK16-217ENST00000522234 ARAP1Q96P48 1450 aa32.37■■■□□ 2.77
CDK16-217ENST00000522234 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
CDK16-217ENST00000522234 CTTNBP2Q8WZ74 1663 aa32.34■■■□□ 2.77
CDK16-217ENST00000522234 ARHGAP35Q9NRY4 1499 aa32.33■■■□□ 2.77
CDK16-217ENST00000522234 FHAD1B1AJZ9 1412 aa32.3■■■□□ 2.76
CDK16-217ENST00000522234 ADAMTS12P58397 1594 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms