Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.73e-6■■■□□ 16.6
SUB1P53999 H2AFY-209ENST00000506532 677 ntTSL 210.68□□□□□ -0.73e-6■■■□□ 16.6
SUB1P53999 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.713e-6■■■□□ 16.6
SUB1P53999 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.753e-6■■■□□ 16.6
SUB1P53999 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.27□□□□□ -0.776e-9■■■□□ 16.6
SUB1P53999 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.793e-6■■■□□ 16.6
SUB1P53999 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.793e-6■■■□□ 16.6
SUB1P53999 GSTO1-206ENST00000493946 874 ntTSL 210.03□□□□□ -0.86e-9■■■□□ 16.6
SUB1P53999 H2AFY-219ENST00000513210 775 ntTSL 29.67□□□□□ -0.863e-6■■■□□ 16.6
SUB1P53999 HPS1-212ENST00000480020 795 ntTSL 59.47□□□□□ -0.893e-6■■■□□ 16.6
SUB1P53999 H2AFY-206ENST00000504197 498 ntTSL 29.47□□□□□ -0.893e-6■■■□□ 16.6
SUB1P53999 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.893e-6■■■□□ 16.6
SUB1P53999 RBM28-202ENST00000415472 2251 ntTSL 2 BASIC9.33□□□□□ -0.923e-6■■■□□ 16.6
SUB1P53999 SPIDR-217ENST00000522117 2745 ntTSL 29.3□□□□□ -0.923e-6■■■□□ 16.6
SUB1P53999 TCERG1-201ENST00000296702 4654 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.933e-6■■■□□ 16.6
SUB1P53999 AURKB-207ENST00000580998 746 ntTSL 39.19□□□□□ -0.943e-6■■■□□ 16.6
SUB1P53999 HPS1-208ENST00000467246 2791 ntTSL 1 (best)9.17□□□□□ -0.943e-6■■■□□ 16.6
SUB1P53999 GPBP1L1-202ENST00000355105 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.013e-6■■■□□ 16.6
SUB1P53999 AURKB-204ENST00000578549 939 ntTSL 1 (best) BASIC8.72□□□□□ -1.013e-6■■■□□ 16.6
SUB1P53999 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.13e-6■■■□□ 16.6
SUB1P53999 QARS-228ENST00000634432 582 ntTSL 37.94□□□□□ -1.143e-6■■■□□ 16.6
SUB1P53999 SPIDR-205ENST00000518060 482 ntAPPRIS ALT2 TSL 3 BASIC7.91□□□□□ -1.143e-6■■■□□ 16.6
SUB1P53999 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.183e-6■■■□□ 16.6
SUB1P53999 KIAA0100-211ENST00000581064 555 ntTSL 27.5□□□□□ -1.213e-6■■■□□ 16.6
SUB1P53999 AURKB-205ENST00000578753 467 ntTSL 27.05□□□□□ -1.283e-6■■■□□ 16.6
SUB1P53999 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.333e-6■■■□□ 16.6
SUB1P53999 ARPC4-205ENST00000467289 729 ntTSL 26.41□□□□□ -1.386e-9■■■□□ 16.6
SUB1P53999 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.413e-6■■■□□ 16.6
SUB1P53999 ATP6V1B2-204ENST00000521442 738 ntTSL 36.1□□□□□ -1.433e-6■■■□□ 16.6
SUB1P53999 PGM2-204ENST00000512556 2050 ntTSL 25.29□□□□□ -1.563e-6■■■□□ 16.6
SUB1P53999 TCERG1-206ENST00000506524 3787 ntTSL 1 (best)5□□□□□ -1.613e-6■■■□□ 16.6
SUB1P53999 ATP6V1B2-206ENST00000523482 6907 ntTSL 24.85□□□□□ -1.633e-6■■■□□ 16.6
SUB1P53999 U2SURP-211ENST00000488497 3557 ntTSL 1 (best)4.74□□□□□ -1.653e-6■■■□□ 16.6
SUB1P53999 CAPNS1-208ENST00000589162 701 ntTSL 34.65□□□□□ -1.674e-6■■■□□ 16.6
SUB1P53999 GPBP1L1-206ENST00000479235 3121 ntTSL 24.54□□□□□ -1.683e-6■■■□□ 16.6
SUB1P53999 RBM28-205ENST00000481788 1052 ntTSL 34.45□□□□□ -1.73e-6■■■□□ 16.6
SUB1P53999 TCERG1-211ENST00000511077 1846 ntTSL 24.18□□□□□ -1.743e-6■■■□□ 16.6
SUB1P53999 GPBP1L1-204ENST00000467032 592 ntTSL 23.08□□□□□ -1.923e-6■■■□□ 16.6
SUB1P53999 GSTO1-203ENST00000432659 592 ntTSL 22.9□□□□□ -1.956e-9■■■□□ 16.6
SUB1P53999 SPAG9-208ENST00000509724 681 ntTSL 31.77□□□□□ -2.133e-6■■■□□ 16.6
SUB1P53999 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.941e-40■■■□□ 16.6
SUB1P53999 RPL23-207ENST00000577407 615 ntTSL 2 BASIC9.17□□□□□ -0.941e-40■■■□□ 16.6
SUB1P53999 RPL23-204ENST00000394333 444 ntTSL 2 BASIC8.73□□□□□ -1.011e-40■■■□□ 16.6
SUB1P53999 RPL23-201ENST00000245857 588 ntTSL 3 BASIC8.1□□□□□ -1.111e-40■■■□□ 16.6
SUB1P53999 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.121e-40■■■□□ 16.6
SUB1P53999 RPL23-211ENST00000584912 2779 ntTSL 1 (best)7.3□□□□□ -1.241e-40■■■□□ 16.6
SUB1P53999 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.15■□□□□ 0.54e-6■■■□□ 16.6
SUB1P53999 CAPNS1-202ENST00000586851 616 ntTSL 36.39□□□□□ -1.394e-6■■■□□ 16.6
SUB1P53999 CAPNS1-203ENST00000586963 570 ntTSL 25.83□□□□□ -1.484e-6■■■□□ 16.6
SUB1P53999 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.84e-6■■■□□ 16.6
SUB1P53999 KLHL12-202ENST00000367259 2257 ntTSL 2 BASIC7.31□□□□□ -1.244e-6■■■□□ 16.6
SUB1P53999 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.96■□□□□ 0.151e-6■■■□□ 16.6
SUB1P53999 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.511e-6■■■□□ 16.6
SUB1P53999 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.193e-6■■■□□ 16.6
SUB1P53999 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.211e-6■■■□□ 16.6
SUB1P53999 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.243e-6■■■□□ 16.6
SUB1P53999 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.53□□□□□ -0.241e-6■■■□□ 16.6
SUB1P53999 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.483e-6■■■□□ 16.6
SUB1P53999 SPIDR-210ENST00000519362 1807 ntTSL 29.94□□□□□ -0.823e-6■■■□□ 16.6
SUB1P53999 SPIDR-209ENST00000519141 1699 ntTSL 29.87□□□□□ -0.833e-6■■■□□ 16.6
SUB1P53999 SPIDR-203ENST00000517693 1848 ntAPPRIS ALT2 TSL 2 BASIC9.55□□□□□ -0.883e-6■■■□□ 16.6
SUB1P53999 SPIDR-211ENST00000519401 2090 ntTSL 28.95□□□□□ -0.983e-6■■■□□ 16.6
SUB1P53999 SPIDR-206ENST00000518074 2819 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.023e-6■■■□□ 16.6
SUB1P53999 SPIDR-224ENST00000524126 2614 ntTSL 1 (best)7.94□□□□□ -1.143e-6■■■□□ 16.6
SUB1P53999 SPIDR-213ENST00000521214 3577 ntTSL 26.22□□□□□ -1.413e-6■■■□□ 16.6
SUB1P53999 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.92□□□□□ -1.461e-6■■■□□ 16.6
SUB1P53999 CLPTM1L-215ENST00000515719 382 ntTSL 212.83□□□□□ -0.362e-7■■■□□ 16.6
SUB1P53999 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.678e-8■■■□□ 16.6
SUB1P53999 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.01□□□□□ -1.458e-8■■■□□ 16.6
SUB1P53999 SARAF-203ENST00000518174 1981 ntTSL 515.04■□□□□ -02e-11■■■□□ 16.6
SUB1P53999 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.43□□□□□ -0.12e-11■■■□□ 16.6
SUB1P53999 SARAF-206ENST00000520303 1803 ntTSL 1 (best)14.37□□□□□ -0.112e-11■■■□□ 16.6
SUB1P53999 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.272e-11■■■□□ 16.6
SUB1P53999 SARAF-208ENST00000521265 1741 ntTSL 59.79□□□□□ -0.842e-11■■■□□ 16.6
SUB1P53999 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.424e-7■■■□□ 16.5
SUB1P53999 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.62e-6■■■□□ 16.5
SUB1P53999 EIF3E-214ENST00000522352 611 ntTSL 32.91□□□□□ -1.948e-16■■■□□ 16.5
SUB1P53999 EIF3E-208ENST00000519517 726 ntTSL 32.04□□□□□ -2.088e-16■■■□□ 16.5
SUB1P53999 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.823e-6■■■□□ 16.5
SUB1P53999 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.673e-6■■■□□ 16.5
SUB1P53999 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.473e-6■■■□□ 16.5
SUB1P53999 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.06■□□□□ 0.323e-6■■■□□ 16.5
SUB1P53999 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.65■□□□□ 0.263e-6■■■□□ 16.5
SUB1P53999 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.243e-6■■■□□ 16.5
SUB1P53999 TECR-202ENST00000593637 1043 ntTSL 316.47■□□□□ 0.233e-6■■■□□ 16.5
SUB1P53999 TECR-209ENST00000596953 1043 ntTSL 216.47■□□□□ 0.233e-6■■■□□ 16.5
SUB1P53999 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.2■□□□□ 0.183e-6■■■□□ 16.5
SUB1P53999 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.187e-9■■■□□ 16.5
SUB1P53999 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.12■□□□□ 0.173e-6■■■□□ 16.5
SUB1P53999 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.123e-6■■■□□ 16.5
SUB1P53999 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.43■□□□□ 0.063e-6■■■□□ 16.5
SUB1P53999 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.053e-6■■■□□ 16.5
SUB1P53999 TECR-204ENST00000594545 735 ntTSL 315.27■□□□□ 0.043e-6■■■□□ 16.5
SUB1P53999 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.023e-6■■■□□ 16.5
SUB1P53999 PILRB-204ENST00000438028 1822 ntTSL 1 (best)15.1■□□□□ 0.013e-6■■■□□ 16.5
SUB1P53999 PILRB-202ENST00000422808 1599 ntTSL 1 (best)14.94□□□□□ -0.023e-6■■■□□ 16.5
SUB1P53999 POLR1E-203ENST00000442009 1805 ntTSL 214.94□□□□□ -0.023e-6■■■□□ 16.5
SUB1P53999 PILRB-206ENST00000443526 1364 ntTSL 1 (best)14.9□□□□□ -0.023e-6■■■□□ 16.5
SUB1P53999 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.033e-6■■■□□ 16.5
SUB1P53999 PANK4-210ENST00000505228 1913 ntTSL 514.83□□□□□ -0.043e-6■■■□□ 16.5
Retrieved 100 of 11,644 protein–RNA pairs in 225.9 ms