RNA–Protein interactions for RNA: ENST00000442009.6

POLR1E-203, Transcript of RNA polymerase I subunit E, humanhuman

TSL 2

Gene POLR1E, Length 1,805 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-203ENST00000442009 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
POLR1E-203ENST00000442009 CCDC180Q9P1Z9 1646 aa36.95■■■■□ 3.51
POLR1E-203ENST00000442009 ZCCHC6Q5VYS8 1495 aaKnown RBP35.68■■■■□ 3.3
POLR1E-203ENST00000442009 DCAF1Q9Y4B6 1507 aa35.15■■■■□ 3.22
POLR1E-203ENST00000442009 DCAF8L2P0C7V8 631 aa34.87■■■■□ 3.17
POLR1E-203ENST00000442009 ABCC9O60706 1549 aa34.77■■■■□ 3.16
POLR1E-203ENST00000442009 MYO15BQ96JP2 1530 aa34.7■■■■□ 3.14
POLR1E-203ENST00000442009 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
POLR1E-203ENST00000442009 NACADO15069 1562 aa34.39■■■■□ 3.1
POLR1E-203ENST00000442009 RB1CC1Q8TDY2 1594 aa34.03■■■■□ 3.04
POLR1E-203ENST00000442009 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
POLR1E-203ENST00000442009 UNC13AQ9UPW8 1703 aa33.42■■■□□ 2.94
POLR1E-203ENST00000442009 SUPT5HO00267 1087 aaKnown RBP33.35■■■□□ 2.93
POLR1E-203ENST00000442009 BICRAQ9NZM4 1560 aa33.09■■■□□ 2.89
POLR1E-203ENST00000442009 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
POLR1E-203ENST00000442009 CECR2Q9BXF3 1484 aa32.98■■■□□ 2.87
POLR1E-203ENST00000442009 PABPN1Q86U42 306 aaKnown RBP eCLIP32.82■■■□□ 2.84
POLR1E-203ENST00000442009 MROH2BQ7Z745 1585 aa32.8■■■□□ 2.84
POLR1E-203ENST00000442009 BAZ1AQ9NRL2 1556 aaPredicted RBP32.74■■■□□ 2.83
POLR1E-203ENST00000442009 SMARCA4P51532 1647 aa32.59■■■□□ 2.81
POLR1E-203ENST00000442009 WIZO95785 1651 aa32.52■■■□□ 2.8
POLR1E-203ENST00000442009 PEG3Q9GZU2 1588 aa32.25■■■□□ 2.75
POLR1E-203ENST00000442009 TOP2AP11388 1531 aaKnown RBP32.18■■■□□ 2.74
POLR1E-203ENST00000442009 CHIC1Q5VXU3 224 aa32.08■■■□□ 2.73
POLR1E-203ENST00000442009 ATAD2BQ9ULI0 1458 aa32.04■■■□□ 2.72
POLR1E-203ENST00000442009 EIF4G1Q04637 1599 aaKnown RBP32.02■■■□□ 2.72
POLR1E-203ENST00000442009 SMARCA2P51531 1590 aa31.99■■■□□ 2.71
POLR1E-203ENST00000442009 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
POLR1E-203ENST00000442009 BAZ1BQ9UIG0 1483 aaKnown RBP31.81■■■□□ 2.68
POLR1E-203ENST00000442009 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
POLR1E-203ENST00000442009 HMGXB3Q12766 1538 aa31.7■■■□□ 2.67
POLR1E-203ENST00000442009 CC2D2AQ9P2K1 1620 aa31.51■■■□□ 2.63
POLR1E-203ENST00000442009 TRIM41Q8WV44 630 aa31.37■■■□□ 2.61
POLR1E-203ENST00000442009 ABCC8Q09428 1581 aa31.2■■■□□ 2.59
POLR1E-203ENST00000442009 CFTRP13569 1480 aa31.08■■■□□ 2.57
POLR1E-203ENST00000442009 WRNQ14191 1432 aaPredicted RBP eCLIP30.99■■■□□ 2.55
POLR1E-203ENST00000442009 CADPSQ9ULU8 1353 aa30.93■■■□□ 2.54
POLR1E-203ENST00000442009 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
POLR1E-203ENST00000442009 SYNJ1O43426 1573 aa30.89■■■□□ 2.54
POLR1E-203ENST00000442009 LOC105371045A0A1W2PR82 267 aa30.84■■■□□ 2.53
POLR1E-203ENST00000442009 TOP2BQ02880 1626 aa30.76■■■□□ 2.52
POLR1E-203ENST00000442009 FAM9AQ8IZU1 332 aaPredicted RBP30.75■■■□□ 2.51
POLR1E-203ENST00000442009 DNAJC5BQ9UF47 199 aa30.74■■■□□ 2.51
POLR1E-203ENST00000442009 BIVM-ERCC5R4GMW8 1640 aa30.74■■■□□ 2.51
POLR1E-203ENST00000442009 SOGA1O94964 1423 aa30.67■■■□□ 2.5
POLR1E-203ENST00000442009 CUX1P39880 1505 aa30.65■■■□□ 2.5
POLR1E-203ENST00000442009 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
POLR1E-203ENST00000442009 EEA1Q15075 1411 aa30.62■■■□□ 2.49
POLR1E-203ENST00000442009 NESP48681 1621 aa30.61■■■□□ 2.49
POLR1E-203ENST00000442009 RUSC2Q8N2Y8 1516 aa30.57■■■□□ 2.48
POLR1E-203ENST00000442009 FANCD2Q9BXW9 1451 aa30.56■■■□□ 2.48
POLR1E-203ENST00000442009 CSRNP3Q8WYN3 585 aa30.45■■■□□ 2.46
POLR1E-203ENST00000442009 PDS5BQ9NTI5 1447 aa30.35■■■□□ 2.45
POLR1E-203ENST00000442009 CEP164Q9UPV0 1460 aa30.33■■■□□ 2.45
POLR1E-203ENST00000442009 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.44
POLR1E-203ENST00000442009 FGD5Q6ZNL6 1462 aa30.27■■■□□ 2.44
POLR1E-203ENST00000442009 TOPBP1Q92547 1522 aa30.26■■■□□ 2.44
POLR1E-203ENST00000442009 EHMT2Q96KQ7 1210 aa30.26■■■□□ 2.43
POLR1E-203ENST00000442009 KIF21AQ7Z4S6 1674 aa30.23■■■□□ 2.43
POLR1E-203ENST00000442009 KIF21BO75037 1637 aa30.23■■■□□ 2.43
POLR1E-203ENST00000442009 URB2Q14146 1524 aaKnown RBP30.2■■■□□ 2.43
POLR1E-203ENST00000442009 KIF27Q86VH2 1401 aa30.19■■■□□ 2.42
POLR1E-203ENST00000442009 GOLGA3Q08378 1498 aa30.18■■■□□ 2.42
POLR1E-203ENST00000442009 TNIKQ9UKE5 1360 aa30.15■■■□□ 2.42
POLR1E-203ENST00000442009 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
POLR1E-203ENST00000442009 PRXQ9BXM0 1461 aa30.09■■■□□ 2.41
POLR1E-203ENST00000442009 CUX2O14529 1486 aa30.07■■■□□ 2.4
POLR1E-203ENST00000442009 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
POLR1E-203ENST00000442009 RAPGEF2Q9Y4G8 1499 aa30.03■■■□□ 2.4
POLR1E-203ENST00000442009 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.4
POLR1E-203ENST00000442009 ERICH3Q5RHP9 1530 aa30.01■■■□□ 2.39
POLR1E-203ENST00000442009 UBTFP17480 764 aaKnown RBP29.99■■■□□ 2.39
POLR1E-203ENST00000442009 IGF1RP08069 1367 aa29.97■■■□□ 2.39
POLR1E-203ENST00000442009 CEP162Q5TB80 1403 aa29.96■■■□□ 2.39
POLR1E-203ENST00000442009 MRC2Q9UBG0 1479 aa29.96■■■□□ 2.39
POLR1E-203ENST00000442009 WDR97A6NE52 1622 aa29.94■■■□□ 2.38
POLR1E-203ENST00000442009 TARBP1Q13395 1621 aaKnown RBP29.84■■■□□ 2.37
POLR1E-203ENST00000442009 WDR62O43379 1518 aa29.84■■■□□ 2.37
POLR1E-203ENST00000442009 ABCA5Q8WWZ7 1642 aa29.79■■■□□ 2.36
POLR1E-203ENST00000442009 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
POLR1E-203ENST00000442009 ERCC6Q03468 1493 aa29.74■■■□□ 2.35
POLR1E-203ENST00000442009 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
POLR1E-203ENST00000442009 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
POLR1E-203ENST00000442009 CLIP1P30622 1438 aa29.7■■■□□ 2.34
POLR1E-203ENST00000442009 GAPVD1Q14C86 1478 aa29.68■■■□□ 2.34
POLR1E-203ENST00000442009 CUL7Q14999 1698 aa29.68■■■□□ 2.34
POLR1E-203ENST00000442009 IFT140Q96RY7 1462 aa29.63■■■□□ 2.33
POLR1E-203ENST00000442009 AQRO60306 1485 aaKnown RBP eCLIP29.51■■■□□ 2.314e-7■■■■□ 26.1
POLR1E-203ENST00000442009 PBRM1Q86U86 1689 aa29.5■■■□□ 2.31
POLR1E-203ENST00000442009 TRIM26Q12899 539 aaPredicted RBP29.5■■■□□ 2.31
POLR1E-203ENST00000442009 PCGF6Q9BYE7 350 aa29.48■■■□□ 2.31
POLR1E-203ENST00000442009 ZNF608Q9ULD9 1512 aaPredicted RBP29.48■■■□□ 2.31
POLR1E-203ENST00000442009 VPS8Q8N3P4 1428 aa29.47■■■□□ 2.31
POLR1E-203ENST00000442009 GRIN2BQ13224 1484 aa29.43■■■□□ 2.3
POLR1E-203ENST00000442009 ARAP1Q96P48 1450 aa29.43■■■□□ 2.3
POLR1E-203ENST00000442009 ARHGAP35Q9NRY4 1499 aa29.41■■■□□ 2.3
POLR1E-203ENST00000442009 RANGAP1P46060 587 aaPredicted RBP29.41■■■□□ 2.3
POLR1E-203ENST00000442009 FHAD1B1AJZ9 1412 aa29.37■■■□□ 2.29
POLR1E-203ENST00000442009 CTTNBP2Q8WZ74 1663 aa29.37■■■□□ 2.29
POLR1E-203ENST00000442009 EIF4G3O43432 1585 aaKnown RBP29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms