RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-210ENST00000519362 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
SPIDR-210ENST00000519362 CCDC180Q9P1Z9 1646 aa23.35■■□□□ 1.33
SPIDR-210ENST00000519362 ZCCHC6Q5VYS8 1495 aaKnown RBP22.83■■□□□ 1.25
SPIDR-210ENST00000519362 SHROOM4Q9ULL8 1493 aa22.41■■□□□ 1.18
SPIDR-210ENST00000519362 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
SPIDR-210ENST00000519362 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
SPIDR-210ENST00000519362 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
SPIDR-210ENST00000519362 SUPT5HO00267 1087 aaKnown RBP21.77■■□□□ 1.08
SPIDR-210ENST00000519362 ABCC9O60706 1549 aa21.73■■□□□ 1.07
SPIDR-210ENST00000519362 NACADO15069 1562 aa21.66■■□□□ 1.06
SPIDR-210ENST00000519362 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
SPIDR-210ENST00000519362 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
SPIDR-210ENST00000519362 RSF1Q96T23 1441 aaPredicted RBP21.19■□□□□ 0.98
SPIDR-210ENST00000519362 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
SPIDR-210ENST00000519362 CECR2Q9BXF3 1484 aa21.03■□□□□ 0.96
SPIDR-210ENST00000519362 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
SPIDR-210ENST00000519362 MROH2BQ7Z745 1585 aa20.95■□□□□ 0.94
SPIDR-210ENST00000519362 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
SPIDR-210ENST00000519362 WIZO95785 1651 aa20.8■□□□□ 0.92
SPIDR-210ENST00000519362 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.92
SPIDR-210ENST00000519362 SMARCA4P51532 1647 aa20.71■□□□□ 0.91
SPIDR-210ENST00000519362 PABPN1Q86U42 306 aaKnown RBP eCLIP20.6■□□□□ 0.89
SPIDR-210ENST00000519362 TOP2AP11388 1531 aaKnown RBP20.57■□□□□ 0.88
SPIDR-210ENST00000519362 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
SPIDR-210ENST00000519362 PEG3Q9GZU2 1588 aa20.44■□□□□ 0.86
SPIDR-210ENST00000519362 TRIM41Q8WV44 630 aa20.42■□□□□ 0.86
SPIDR-210ENST00000519362 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
SPIDR-210ENST00000519362 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.86
SPIDR-210ENST00000519362 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
SPIDR-210ENST00000519362 ATAD2BQ9ULI0 1458 aa20.27■□□□□ 0.84
SPIDR-210ENST00000519362 BAZ1BQ9UIG0 1483 aaKnown RBP20.16■□□□□ 0.82
SPIDR-210ENST00000519362 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
SPIDR-210ENST00000519362 FAM9AQ8IZU1 332 aaPredicted RBP20.08■□□□□ 0.8
SPIDR-210ENST00000519362 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
SPIDR-210ENST00000519362 HMGXB3Q12766 1538 aa20.01■□□□□ 0.79
SPIDR-210ENST00000519362 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
SPIDR-210ENST00000519362 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
SPIDR-210ENST00000519362 SOGA1O94964 1423 aa19.84■□□□□ 0.77
SPIDR-210ENST00000519362 EEA1Q15075 1411 aa19.83■□□□□ 0.77
SPIDR-210ENST00000519362 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.77
SPIDR-210ENST00000519362 SYNJ1O43426 1573 aa19.83■□□□□ 0.76
SPIDR-210ENST00000519362 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
SPIDR-210ENST00000519362 RUSC2Q8N2Y8 1516 aa19.75■□□□□ 0.75
SPIDR-210ENST00000519362 TRIM26Q12899 539 aaPredicted RBP19.71■□□□□ 0.75
SPIDR-210ENST00000519362 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
SPIDR-210ENST00000519362 CFTRP13569 1480 aa19.7■□□□□ 0.74
SPIDR-210ENST00000519362 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
SPIDR-210ENST00000519362 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
SPIDR-210ENST00000519362 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
SPIDR-210ENST00000519362 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
SPIDR-210ENST00000519362 HRCP23327 699 aa19.62■□□□□ 0.73
SPIDR-210ENST00000519362 GOLGA3Q08378 1498 aa19.59■□□□□ 0.73
SPIDR-210ENST00000519362 PRDM2Q13029 1718 aa19.58■□□□□ 0.73
SPIDR-210ENST00000519362 KIF21BO75037 1637 aa19.57■□□□□ 0.72
SPIDR-210ENST00000519362 CEP162Q5TB80 1403 aa19.56■□□□□ 0.72
SPIDR-210ENST00000519362 CUX1P39880 1505 aa19.55■□□□□ 0.72
SPIDR-210ENST00000519362 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
SPIDR-210ENST00000519362 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
SPIDR-210ENST00000519362 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
SPIDR-210ENST00000519362 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
SPIDR-210ENST00000519362 PRXQ9BXM0 1461 aa19.37■□□□□ 0.69
SPIDR-210ENST00000519362 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
SPIDR-210ENST00000519362 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
SPIDR-210ENST00000519362 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
SPIDR-210ENST00000519362 FANCD2Q9BXW9 1451 aa19.31■□□□□ 0.68
SPIDR-210ENST00000519362 CLIP1P30622 1438 aa19.3■□□□□ 0.68
SPIDR-210ENST00000519362 FGD5Q6ZNL6 1462 aa19.26■□□□□ 0.67
SPIDR-210ENST00000519362 NESP48681 1621 aa19.24■□□□□ 0.67
SPIDR-210ENST00000519362 LAMC3Q9Y6N6 1575 aa19.23■□□□□ 0.67
SPIDR-210ENST00000519362 DNMBPQ6XZF7 1577 aa19.21■□□□□ 0.67
SPIDR-210ENST00000519362 CUX2O14529 1486 aa19.21■□□□□ 0.67
SPIDR-210ENST00000519362 VPS8Q8N3P4 1428 aa19.2■□□□□ 0.66
SPIDR-210ENST00000519362 IGF1RP08069 1367 aa19.17■□□□□ 0.66
SPIDR-210ENST00000519362 TOPBP1Q92547 1522 aa19.16■□□□□ 0.66
SPIDR-210ENST00000519362 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-210ENST00000519362 POLA1P09884 1462 aaPredicted RBP19.11■□□□□ 0.65
SPIDR-210ENST00000519362 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
SPIDR-210ENST00000519362 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
SPIDR-210ENST00000519362 PDS5BQ9NTI5 1447 aa19.07■□□□□ 0.64
SPIDR-210ENST00000519362 URB2Q14146 1524 aaKnown RBP19.07■□□□□ 0.64
SPIDR-210ENST00000519362 RAD54L2Q9Y4B4 1467 aa19.06■□□□□ 0.64
SPIDR-210ENST00000519362 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
SPIDR-210ENST00000519362 TTBK1Q5TCY1 1321 aaPredicted RBP19.05■□□□□ 0.64
SPIDR-210ENST00000519362 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
SPIDR-210ENST00000519362 ARHGAP35Q9NRY4 1499 aa19■□□□□ 0.63
SPIDR-210ENST00000519362 WDR97A6NE52 1622 aa18.99■□□□□ 0.63
SPIDR-210ENST00000519362 KIF21AQ7Z4S6 1674 aa18.99■□□□□ 0.63
SPIDR-210ENST00000519362 APLP2Q06481 763 aa18.96■□□□□ 0.63
SPIDR-210ENST00000519362 CUL7Q14999 1698 aa18.94■□□□□ 0.62
SPIDR-210ENST00000519362 ABCA5Q8WWZ7 1642 aa18.91■□□□□ 0.62
SPIDR-210ENST00000519362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
SPIDR-210ENST00000519362 TARBP1Q13395 1621 aaKnown RBP18.85■□□□□ 0.61
SPIDR-210ENST00000519362 CCER1Q8TC90 406 aaPredicted RBP18.84■□□□□ 0.61
SPIDR-210ENST00000519362 GAPVD1Q14C86 1478 aa18.83■□□□□ 0.6
SPIDR-210ENST00000519362 TDRD9Q8NDG6 1382 aaKnown RBP18.83■□□□□ 0.6
SPIDR-210ENST00000519362 KANK4Q5T7N3 995 aaPredicted RBP18.81■□□□□ 0.6
SPIDR-210ENST00000519362 MRC2Q9UBG0 1479 aa18.81■□□□□ 0.6
SPIDR-210ENST00000519362 CTTNBP2Q8WZ74 1663 aa18.79■□□□□ 0.6
SPIDR-210ENST00000519362 MAP3K1Q13233 1512 aa18.78■□□□□ 0.6
SPIDR-210ENST00000519362 EFCAB5A4FU69 1503 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms