RNA–Protein interactions for RNA: ENST00000467289.5

ARPC4-205, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 2

Gene ARPC4, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-205ENST00000467289 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
ARPC4-205ENST00000467289 ABCC9O60706 1549 aa22.74■■□□□ 1.23
ARPC4-205ENST00000467289 CCDC180Q9P1Z9 1646 aa22.22■■□□□ 1.15
ARPC4-205ENST00000467289 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
ARPC4-205ENST00000467289 RB1CC1Q8TDY2 1594 aa21.36■■□□□ 1.01
ARPC4-205ENST00000467289 NACADO15069 1562 aa21.09■□□□□ 0.97
ARPC4-205ENST00000467289 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
ARPC4-205ENST00000467289 UNC13AQ9UPW8 1703 aa21■□□□□ 0.95
ARPC4-205ENST00000467289 BICRAQ9NZM4 1560 aa20.88■□□□□ 0.93
ARPC4-205ENST00000467289 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
ARPC4-205ENST00000467289 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
ARPC4-205ENST00000467289 CC2D2AQ9P2K1 1620 aa20.51■□□□□ 0.87
ARPC4-205ENST00000467289 CECR2Q9BXF3 1484 aa20.49■□□□□ 0.87
ARPC4-205ENST00000467289 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
ARPC4-205ENST00000467289 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
ARPC4-205ENST00000467289 SCRIBQ14160 1630 aa20.29■□□□□ 0.84
ARPC4-205ENST00000467289 ZCCHC6Q5VYS8 1495 aaKnown RBP20.28■□□□□ 0.84
ARPC4-205ENST00000467289 DNAJC5Q9H3Z4 198 aa20.23■□□□□ 0.83
ARPC4-205ENST00000467289 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
ARPC4-205ENST00000467289 CUX2O14529 1486 aa19.7■□□□□ 0.74
ARPC4-205ENST00000467289 ERCC6Q03468 1493 aa19.58■□□□□ 0.72
ARPC4-205ENST00000467289 NCAPD3P42695 1498 aa19.49■□□□□ 0.71
ARPC4-205ENST00000467289 NESP48681 1621 aa19.44■□□□□ 0.7
ARPC4-205ENST00000467289 ATAD2BQ9ULI0 1458 aa19.41■□□□□ 0.7
ARPC4-205ENST00000467289 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
ARPC4-205ENST00000467289 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
ARPC4-205ENST00000467289 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
ARPC4-205ENST00000467289 SMARCA2P51531 1590 aa19.27■□□□□ 0.67
ARPC4-205ENST00000467289 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
ARPC4-205ENST00000467289 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
ARPC4-205ENST00000467289 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
ARPC4-205ENST00000467289 LAMC3Q9Y6N6 1575 aa19.12■□□□□ 0.65
ARPC4-205ENST00000467289 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
ARPC4-205ENST00000467289 BAZ1AQ9NRL2 1556 aaPredicted RBP19.06■□□□□ 0.64
ARPC4-205ENST00000467289 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
ARPC4-205ENST00000467289 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
ARPC4-205ENST00000467289 WDR62O43379 1518 aa18.91■□□□□ 0.62
ARPC4-205ENST00000467289 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
ARPC4-205ENST00000467289 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
ARPC4-205ENST00000467289 WIZO95785 1651 aa18.73■□□□□ 0.59
ARPC4-205ENST00000467289 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
ARPC4-205ENST00000467289 FANCD2Q9BXW9 1451 aa18.69■□□□□ 0.58
ARPC4-205ENST00000467289 OSCARQ8IYS5 282 aa18.67■□□□□ 0.58
ARPC4-205ENST00000467289 RIMBP3CA6NJZ7 1639 aa18.61■□□□□ 0.57
ARPC4-205ENST00000467289 RIMBP3BA6NNM3 1639 aa18.61■□□□□ 0.57
ARPC4-205ENST00000467289 RIMBP3Q9UFD9 1639 aa18.61■□□□□ 0.57
ARPC4-205ENST00000467289 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
ARPC4-205ENST00000467289 CFTRP13569 1480 aa18.58■□□□□ 0.57
ARPC4-205ENST00000467289 ARHGEF11O15085 1522 aa18.49■□□□□ 0.55
ARPC4-205ENST00000467289 ZNF608Q9ULD9 1512 aaPredicted RBP18.48■□□□□ 0.55
ARPC4-205ENST00000467289 TOP2AP11388 1531 aaKnown RBP18.4■□□□□ 0.54
ARPC4-205ENST00000467289 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
ARPC4-205ENST00000467289 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
ARPC4-205ENST00000467289 IFT140Q96RY7 1462 aa18.35■□□□□ 0.53
ARPC4-205ENST00000467289 CYB5RLQ6IPT4 315 aa18.33■□□□□ 0.52
ARPC4-205ENST00000467289 EIF4G3O43432 1585 aaKnown RBP18.33■□□□□ 0.52
ARPC4-205ENST00000467289 ARAP1Q96P48 1450 aa18.31■□□□□ 0.52
ARPC4-205ENST00000467289 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
ARPC4-205ENST00000467289 CHD1O14646 1710 aa18.29■□□□□ 0.52
ARPC4-205ENST00000467289 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
ARPC4-205ENST00000467289 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
ARPC4-205ENST00000467289 AQRO60306 1485 aaKnown RBP eCLIP18.21■□□□□ 0.513e-6■■■■□ 22.1
ARPC4-205ENST00000467289 TARBP1Q13395 1621 aaKnown RBP18.2■□□□□ 0.5
ARPC4-205ENST00000467289 DNMBPQ6XZF7 1577 aa18.17■□□□□ 0.5
ARPC4-205ENST00000467289 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
ARPC4-205ENST00000467289 FBLN2P98095 1184 aa18.1■□□□□ 0.49
ARPC4-205ENST00000467289 POLA1P09884 1462 aaPredicted RBP18.08■□□□□ 0.49
ARPC4-205ENST00000467289 CLASP1Q7Z460 1538 aa18.06■□□□□ 0.48
ARPC4-205ENST00000467289 RAD54L2Q9Y4B4 1467 aa18.06■□□□□ 0.48
ARPC4-205ENST00000467289 TDRD9Q8NDG6 1382 aaKnown RBP18.01■□□□□ 0.47
ARPC4-205ENST00000467289 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
ARPC4-205ENST00000467289 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
ARPC4-205ENST00000467289 SOGA1O94964 1423 aa17.95■□□□□ 0.46
ARPC4-205ENST00000467289 SYNJ1O43426 1573 aa17.92■□□□□ 0.46
ARPC4-205ENST00000467289 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
ARPC4-205ENST00000467289 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
ARPC4-205ENST00000467289 WDR97A6NE52 1622 aa17.87■□□□□ 0.45
ARPC4-205ENST00000467289 CHMP7Q8WUX9 453 aaPredicted RBP17.86■□□□□ 0.45
ARPC4-205ENST00000467289 GAPVD1Q14C86 1478 aa17.86■□□□□ 0.45
ARPC4-205ENST00000467289 CUX1P39880 1505 aa17.85■□□□□ 0.45
ARPC4-205ENST00000467289 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
ARPC4-205ENST00000467289 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
ARPC4-205ENST00000467289 ERCC6L2Q5T890 1561 aa17.82■□□□□ 0.44
ARPC4-205ENST00000467289 PBRM1Q86U86 1689 aa17.8■□□□□ 0.44
ARPC4-205ENST00000467289 ABCA5Q8WWZ7 1642 aa17.72■□□□□ 0.43
ARPC4-205ENST00000467289 CEP170Q5SW79 1584 aa17.66■□□□□ 0.42
ARPC4-205ENST00000467289 KIF13AQ9H1H9 1805 aa17.65■□□□□ 0.42
ARPC4-205ENST00000467289 ABCA10Q8WWZ4 1543 aa17.65■□□□□ 0.42
ARPC4-205ENST00000467289 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
ARPC4-205ENST00000467289 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
ARPC4-205ENST00000467289 NUP160Q12769 1436 aa17.61■□□□□ 0.41
ARPC4-205ENST00000467289 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
ARPC4-205ENST00000467289 FHAD1B1AJZ9 1412 aa17.46■□□□□ 0.39
ARPC4-205ENST00000467289 PRG4Q92954 1404 aaPredicted RBP17.45■□□□□ 0.38
ARPC4-205ENST00000467289 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
ARPC4-205ENST00000467289 KDM4FA0A1W2PPD8 638 aa17.43■□□□□ 0.38
ARPC4-205ENST00000467289 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
ARPC4-205ENST00000467289 DIP2BQ9P265 1576 aa17.43■□□□□ 0.38
ARPC4-205ENST00000467289 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
ARPC4-205ENST00000467289 FAM69CQ0P6D2 419 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms