RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
SPIDR-211ENST00000519401 CCDC180Q9P1Z9 1646 aa20.29■□□□□ 0.84
SPIDR-211ENST00000519401 PELP1Q8IZL8 1130 aaKnown RBP20.01■□□□□ 0.79
SPIDR-211ENST00000519401 ABCC9O60706 1549 aa19.92■□□□□ 0.78
SPIDR-211ENST00000519401 MYT1Q01538 1121 aa19.59■□□□□ 0.73
SPIDR-211ENST00000519401 HRCP23327 699 aa19.36■□□□□ 0.69
SPIDR-211ENST00000519401 RB1CC1Q8TDY2 1594 aa19.11■□□□□ 0.65
SPIDR-211ENST00000519401 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
SPIDR-211ENST00000519401 NACADO15069 1562 aa19.08■□□□□ 0.64
SPIDR-211ENST00000519401 ZCCHC6Q5VYS8 1495 aaKnown RBP19.05■□□□□ 0.64
SPIDR-211ENST00000519401 MYO15BQ96JP2 1530 aa18.96■□□□□ 0.63
SPIDR-211ENST00000519401 DCAF1Q9Y4B6 1507 aa18.88■□□□□ 0.61
SPIDR-211ENST00000519401 TTBK1Q5TCY1 1321 aaPredicted RBP18.69■□□□□ 0.58
SPIDR-211ENST00000519401 UNC13AQ9UPW8 1703 aa18.68■□□□□ 0.58
SPIDR-211ENST00000519401 PABPN1Q86U42 306 aaKnown RBP eCLIP18.63■□□□□ 0.57
SPIDR-211ENST00000519401 BICRAQ9NZM4 1560 aa18.58■□□□□ 0.56
SPIDR-211ENST00000519401 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
SPIDR-211ENST00000519401 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
SPIDR-211ENST00000519401 PPARGC1BQ86YN6 1023 aaKnown RBP18.51■□□□□ 0.55
SPIDR-211ENST00000519401 PCGF6Q9BYE7 350 aa18.34■□□□□ 0.53
SPIDR-211ENST00000519401 DNAJC5BQ9UF47 199 aa18.32■□□□□ 0.52
SPIDR-211ENST00000519401 SHROOM4Q9ULL8 1493 aa18.31■□□□□ 0.52
SPIDR-211ENST00000519401 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
SPIDR-211ENST00000519401 EIF4G1Q04637 1599 aaKnown RBP18.07■□□□□ 0.48
SPIDR-211ENST00000519401 ACIN1Q9UKV3 1341 aaKnown RBP18■□□□□ 0.47
SPIDR-211ENST00000519401 CC2D2AQ9P2K1 1620 aa17.99■□□□□ 0.47
SPIDR-211ENST00000519401 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
SPIDR-211ENST00000519401 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
SPIDR-211ENST00000519401 CENPBP07199 599 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-211ENST00000519401 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
SPIDR-211ENST00000519401 SUPT5HO00267 1087 aaKnown RBP17.76■□□□□ 0.43
SPIDR-211ENST00000519401 NEUROD1Q13562 356 aa17.76■□□□□ 0.43
SPIDR-211ENST00000519401 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
SPIDR-211ENST00000519401 GTF3C3Q9Y5Q9 886 aa17.73■□□□□ 0.43
SPIDR-211ENST00000519401 BCL11AQ9H165 835 aa17.72■□□□□ 0.43
SPIDR-211ENST00000519401 BAZ1AQ9NRL2 1556 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-211ENST00000519401 ATAD2BQ9ULI0 1458 aa17.65■□□□□ 0.42
SPIDR-211ENST00000519401 MROH2BQ7Z745 1585 aa17.64■□□□□ 0.41
SPIDR-211ENST00000519401 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
SPIDR-211ENST00000519401 SMARCA2P51531 1590 aa17.59■□□□□ 0.41
SPIDR-211ENST00000519401 PEG3Q9GZU2 1588 aa17.55■□□□□ 0.4
SPIDR-211ENST00000519401 PRKCSHP14314 528 aaPredicted RBP17.54■□□□□ 0.4
SPIDR-211ENST00000519401 HMGXB3Q12766 1538 aa17.53■□□□□ 0.4
SPIDR-211ENST00000519401 ERICH6Q7L0X2 663 aa17.5■□□□□ 0.39
SPIDR-211ENST00000519401 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
SPIDR-211ENST00000519401 FAM9AQ8IZU1 332 aaPredicted RBP17.48■□□□□ 0.39
SPIDR-211ENST00000519401 WIZO95785 1651 aa17.44■□□□□ 0.38
SPIDR-211ENST00000519401 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
SPIDR-211ENST00000519401 ANP32EQ9BTT0 268 aa17.4■□□□□ 0.38
SPIDR-211ENST00000519401 APLP2Q06481 763 aa17.28■□□□□ 0.36
SPIDR-211ENST00000519401 NESP48681 1621 aa17.25■□□□□ 0.35
SPIDR-211ENST00000519401 DIEXFQ68CQ4 756 aaKnown RBP17.25■□□□□ 0.35
SPIDR-211ENST00000519401 TOP2AP11388 1531 aaKnown RBP17.25■□□□□ 0.35
SPIDR-211ENST00000519401 CLSPNQ9HAW4 1339 aa17.24■□□□□ 0.35
SPIDR-211ENST00000519401 LOC105371045A0A1W2PR82 267 aa17.15■□□□□ 0.34
SPIDR-211ENST00000519401 LAMC3Q9Y6N6 1575 aa17.14■□□□□ 0.33
SPIDR-211ENST00000519401 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
SPIDR-211ENST00000519401 CADPSQ9ULU8 1353 aa17.12■□□□□ 0.33
SPIDR-211ENST00000519401 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
SPIDR-211ENST00000519401 TRIM41Q8WV44 630 aa17.05■□□□□ 0.32
SPIDR-211ENST00000519401 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
SPIDR-211ENST00000519401 PDS5BQ9NTI5 1447 aa17.03■□□□□ 0.32
SPIDR-211ENST00000519401 CFTRP13569 1480 aa17.02■□□□□ 0.31
SPIDR-211ENST00000519401 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
SPIDR-211ENST00000519401 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
SPIDR-211ENST00000519401 CUX2O14529 1486 aa16.95■□□□□ 0.3
SPIDR-211ENST00000519401 FANCD2Q9BXW9 1451 aa16.93■□□□□ 0.3
SPIDR-211ENST00000519401 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
SPIDR-211ENST00000519401 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
SPIDR-211ENST00000519401 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
SPIDR-211ENST00000519401 CCER1Q8TC90 406 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-211ENST00000519401 ZNF316A6NFI3 1004 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-211ENST00000519401 PRDM2Q13029 1718 aa16.83■□□□□ 0.28
SPIDR-211ENST00000519401 WDR62O43379 1518 aa16.82■□□□□ 0.28
SPIDR-211ENST00000519401 SUPT16HQ9Y5B9 1047 aaKnown RBP16.82■□□□□ 0.28
SPIDR-211ENST00000519401 URB2Q14146 1524 aaKnown RBP16.78■□□□□ 0.28
SPIDR-211ENST00000519401 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
SPIDR-211ENST00000519401 MYT1LQ9UL68 1186 aa16.74■□□□□ 0.27
SPIDR-211ENST00000519401 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.73■□□□□ 0.27
SPIDR-211ENST00000519401 TOPBP1Q92547 1522 aa16.66■□□□□ 0.26
SPIDR-211ENST00000519401 MIER1Q8N108 512 aa16.66■□□□□ 0.26
SPIDR-211ENST00000519401 DNMBPQ6XZF7 1577 aa16.63■□□□□ 0.25
SPIDR-211ENST00000519401 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
SPIDR-211ENST00000519401 DNAJC5Q9H3Z4 198 aa16.56■□□□□ 0.24
SPIDR-211ENST00000519401 CUX1P39880 1505 aa16.55■□□□□ 0.24
SPIDR-211ENST00000519401 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
SPIDR-211ENST00000519401 ERICH6BQ5W0A0 696 aa16.54■□□□□ 0.24
SPIDR-211ENST00000519401 POLA1P09884 1462 aaPredicted RBP16.52■□□□□ 0.24
SPIDR-211ENST00000519401 ZNF608Q9ULD9 1512 aaPredicted RBP16.51■□□□□ 0.23
SPIDR-211ENST00000519401 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
SPIDR-211ENST00000519401 UBE2Q2Q8WVN8 375 aa16.49■□□□□ 0.23
SPIDR-211ENST00000519401 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
SPIDR-211ENST00000519401 TARBP1Q13395 1621 aaKnown RBP16.47■□□□□ 0.23
SPIDR-211ENST00000519401 RBM19Q9Y4C8 960 aaKnown RBP16.46■□□□□ 0.22
SPIDR-211ENST00000519401 SOGA1O94964 1423 aa16.44■□□□□ 0.22
SPIDR-211ENST00000519401 EIF4G3O43432 1585 aaKnown RBP16.42■□□□□ 0.22
SPIDR-211ENST00000519401 WRNQ14191 1432 aaPredicted RBP eCLIP16.42■□□□□ 0.22
SPIDR-211ENST00000519401 FANCIQ9NVI1 1328 aa16.41■□□□□ 0.22
SPIDR-211ENST00000519401 AQRO60306 1485 aaKnown RBP eCLIP16.41■□□□□ 0.22
SPIDR-211ENST00000519401 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms