Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
GMDSO60547 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
GMDSO60547 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.37■□□□□ 0.37
GMDSO60547 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.37■□□□□ 0.37
GMDSO60547 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.37■□□□□ 0.37
GMDSO60547 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
GMDSO60547 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
GMDSO60547 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GMDSO60547 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
GMDSO60547 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
GMDSO60547 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.36■□□□□ 0.37
GMDSO60547 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
GMDSO60547 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.36■□□□□ 0.37
GMDSO60547 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.36■□□□□ 0.37
GMDSO60547 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.36■□□□□ 0.37
GMDSO60547 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.36■□□□□ 0.37
GMDSO60547 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.36■□□□□ 0.37
GMDSO60547 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
GMDSO60547 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.36■□□□□ 0.37
GMDSO60547 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
GMDSO60547 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GMDSO60547 AC093503.3-201ENST00000624917 2352 ntBASIC17.35■□□□□ 0.37
GMDSO60547 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.35■□□□□ 0.37
GMDSO60547 AF201337.1-201ENST00000520239 748 ntBASIC17.35■□□□□ 0.37
GMDSO60547 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.35■□□□□ 0.37
GMDSO60547 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
GMDSO60547 AC010980.2-201ENST00000587099 1412 ntBASIC17.35■□□□□ 0.37
GMDSO60547 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
GMDSO60547 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
GMDSO60547 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GMDSO60547 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GMDSO60547 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
GMDSO60547 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GMDSO60547 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GMDSO60547 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
GMDSO60547 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.34■□□□□ 0.37
GMDSO60547 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GMDSO60547 KRT18P68-201ENST00000392293 1000 ntBASIC17.34■□□□□ 0.37
GMDSO60547 AC006970.2-201ENST00000450065 779 ntBASIC17.34■□□□□ 0.37
GMDSO60547 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.34■□□□□ 0.37
GMDSO60547 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.34■□□□□ 0.37
GMDSO60547 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
GMDSO60547 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.34■□□□□ 0.37
GMDSO60547 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
GMDSO60547 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.34■□□□□ 0.37
GMDSO60547 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.34■□□□□ 0.37
GMDSO60547 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.34■□□□□ 0.37
GMDSO60547 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.34■□□□□ 0.37
GMDSO60547 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.33■□□□□ 0.37
GMDSO60547 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
GMDSO60547 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.33■□□□□ 0.37
GMDSO60547 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
GMDSO60547 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GMDSO60547 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GMDSO60547 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.33■□□□□ 0.37
GMDSO60547 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GMDSO60547 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.33■□□□□ 0.37
GMDSO60547 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.33■□□□□ 0.37
GMDSO60547 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GMDSO60547 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.33■□□□□ 0.37
GMDSO60547 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GMDSO60547 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GMDSO60547 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GMDSO60547 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GMDSO60547 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
GMDSO60547 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GMDSO60547 MIR663A-201ENST00000385250 93 ntBASIC17.33■□□□□ 0.36
GMDSO60547 CROCCP5-201ENST00000436658 830 ntBASIC17.33■□□□□ 0.36
GMDSO60547 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GMDSO60547 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
GMDSO60547 CYP2T3P-201ENST00000601990 817 ntBASIC17.33■□□□□ 0.36
GMDSO60547 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms