Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
TNFRSF11BO00300 HCG11-201ENST00000411553 5696 ntBASIC18.18■□□□□ 0.5
TNFRSF11BO00300 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TNFRSF11BO00300 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 AC016405.3-201ENST00000607710 860 ntBASIC18.17■□□□□ 0.5
TNFRSF11BO00300 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 AC010536.3-201ENST00000620306 533 ntBASIC18.17■□□□□ 0.5
TNFRSF11BO00300 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.17■□□□□ 0.5
TNFRSF11BO00300 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.17■□□□□ 0.5
TNFRSF11BO00300 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TNFRSF11BO00300 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 HLA-G-202ENST00000376815 851 ntBASIC18.15■□□□□ 0.5
TNFRSF11BO00300 HLA-G-203ENST00000376818 1127 ntBASIC18.15■□□□□ 0.5
TNFRSF11BO00300 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC18.15■□□□□ 0.5
TNFRSF11BO00300 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms