Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF2Q99496 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF2Q99496 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF2Q99496 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
RNF2Q99496 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RNF2Q99496 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RNF2Q99496 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 AC091799.1-201ENST00000422823 811 ntBASIC15.65■□□□□ 0.1
RNF2Q99496 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.65■□□□□ 0.1
RNF2Q99496 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.65■□□□□ 0.1
RNF2Q99496 FAM21FP-204ENST00000608637 956 ntBASIC15.65■□□□□ 0.1
RNF2Q99496 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF2Q99496 AC011767.1-201ENST00000617410 1153 ntBASIC15.65■□□□□ 0.1
RNF2Q99496 BID-214ENST00000617586 542 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF2Q99496 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.65■□□□□ 0.1
RNF2Q99496 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 POLI-202ENST00000406285 2030 ntTSL 2 BASIC15.65■□□□□ 0.1
RNF2Q99496 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RNF2Q99496 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF2Q99496 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
RNF2Q99496 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.1
RNF2Q99496 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF2Q99496 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RNF2Q99496 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF2Q99496 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF2Q99496 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
RNF2Q99496 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
RNF2Q99496 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 IKBKGP1-201ENST00000612193 1073 ntBASIC15.64■□□□□ 0.09
RNF2Q99496 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.64■□□□□ 0.09
RNF2Q99496 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF2Q99496 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RNF2Q99496 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RNF2Q99496 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC15.64■□□□□ 0.09
RNF2Q99496 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.64■□□□□ 0.09
RNF2Q99496 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.63■□□□□ 0.09
RNF2Q99496 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF2Q99496 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.63■□□□□ 0.09
RNF2Q99496 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.63■□□□□ 0.09
RNF2Q99496 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF2Q99496 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 AP000974.1-201ENST00000623909 2387 ntBASIC15.63■□□□□ 0.09
RNF2Q99496 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RNF2Q99496 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RNF2Q99496 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RNF2Q99496 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.62■□□□□ 0.09
RNF2Q99496 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.62■□□□□ 0.09
RNF2Q99496 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 AL691432.2-201ENST00000607222 2038 ntBASIC15.62■□□□□ 0.09
RNF2Q99496 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RNF2Q99496 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms