Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.37■□□□□ 0.69
SPDL1Q96EA4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 MIR6084-201ENST00000622012 110 ntBASIC19.36■□□□□ 0.69
SPDL1Q96EA4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.36■□□□□ 0.69
SPDL1Q96EA4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.35■□□□□ 0.69
SPDL1Q96EA4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 AC005332.7-201ENST00000614046 2005 ntBASIC19.34■□□□□ 0.69
SPDL1Q96EA4 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.34■□□□□ 0.69
SPDL1Q96EA4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPDL1Q96EA4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.33■□□□□ 0.69
SPDL1Q96EA4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SPDL1Q96EA4 DPP3P2-201ENST00000416030 1696 ntBASIC19.33■□□□□ 0.69
SPDL1Q96EA4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SPDL1Q96EA4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
SPDL1Q96EA4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPDL1Q96EA4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SPDL1Q96EA4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 SLC7A5P2-201ENST00000553010 536 ntBASIC19.33■□□□□ 0.68
SPDL1Q96EA4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SPDL1Q96EA4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms