Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 ISCU-203ENST00000431221 799 ntTSL 2 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
EFCC1Q9HA90 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 MED25-212ENST00000618715 1467 ntTSL 5 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 BX664615.1-201ENST00000443558 458 ntBASIC23.01■■□□□ 1.27
EFCC1Q9HA90 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 ECEL1P2-202ENST00000465689 757 ntBASIC23.01■■□□□ 1.27
EFCC1Q9HA90 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 AC063952.2-201ENST00000498792 1227 ntBASIC23.01■■□□□ 1.27
EFCC1Q9HA90 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
EFCC1Q9HA90 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23■■□□□ 1.27
EFCC1Q9HA90 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC23■■□□□ 1.27
EFCC1Q9HA90 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
EFCC1Q9HA90 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23■■□□□ 1.27
EFCC1Q9HA90 COPE-203ENST00000351079 907 ntTSL 2 BASIC23■■□□□ 1.27
EFCC1Q9HA90 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23■■□□□ 1.27
EFCC1Q9HA90 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
EFCC1Q9HA90 KRT18P48-201ENST00000434763 852 ntBASIC23■■□□□ 1.27
EFCC1Q9HA90 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23■■□□□ 1.27
EFCC1Q9HA90 GRAMD4P8-201ENST00000605465 1115 ntBASIC23■■□□□ 1.27
EFCC1Q9HA90 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
EFCC1Q9HA90 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
EFCC1Q9HA90 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
EFCC1Q9HA90 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
EFCC1Q9HA90 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 AC244015.2-201ENST00000616358 1861 ntBASIC22.99■■□□□ 1.27
EFCC1Q9HA90 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 CRYGFP-201ENST00000418459 633 ntBASIC22.99■■□□□ 1.27
EFCC1Q9HA90 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 EGLN1P1-201ENST00000531623 762 ntBASIC22.99■■□□□ 1.27
EFCC1Q9HA90 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
EFCC1Q9HA90 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
EFCC1Q9HA90 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
EFCC1Q9HA90 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
EFCC1Q9HA90 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
EFCC1Q9HA90 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms