Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.05■□□□□ 0.48
CDC42P60953 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.05■□□□□ 0.48
CDC42P60953 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC42P60953 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC42P60953 AC104187.1-201ENST00000607510 612 ntBASIC18.05■□□□□ 0.48
CDC42P60953 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.05■□□□□ 0.48
CDC42P60953 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.05■□□□□ 0.48
CDC42P60953 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDC42P60953 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.04■□□□□ 0.48
CDC42P60953 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CDC42P60953 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDC42P60953 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.04■□□□□ 0.48
CDC42P60953 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.04■□□□□ 0.48
CDC42P60953 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CDC42P60953 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.04■□□□□ 0.48
CDC42P60953 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CDC42P60953 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CDC42P60953 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDC42P60953 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDC42P60953 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.03■□□□□ 0.48
CDC42P60953 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.03■□□□□ 0.48
CDC42P60953 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDC42P60953 AL356652.1-201ENST00000615962 565 ntBASIC18.03■□□□□ 0.48
CDC42P60953 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.03■□□□□ 0.48
CDC42P60953 MIR6084-201ENST00000622012 110 ntBASIC18.03■□□□□ 0.48
CDC42P60953 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDC42P60953 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDC42P60953 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CDC42P60953 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.03■□□□□ 0.48
CDC42P60953 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDC42P60953 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CDC42P60953 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC42P60953 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC42P60953 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC42P60953 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDC42P60953 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC42P60953 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.02■□□□□ 0.48
CDC42P60953 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.02■□□□□ 0.48
CDC42P60953 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC42P60953 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDC42P60953 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CDC42P60953 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.02■□□□□ 0.48
CDC42P60953 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC42P60953 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC42P60953 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.02■□□□□ 0.48
CDC42P60953 NEFHP1-201ENST00000412845 2629 ntBASIC18.02■□□□□ 0.48
CDC42P60953 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC42P60953 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC42P60953 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.02■□□□□ 0.48
CDC42P60953 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC42P60953 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.02■□□□□ 0.48
CDC42P60953 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDC42P60953 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDC42P60953 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDC42P60953 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDC42P60953 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
CDC42P60953 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms