Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PCDHB2Q9Y5E7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PCDHB2Q9Y5E7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB2Q9Y5E7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB2Q9Y5E7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB2Q9Y5E7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHB2Q9Y5E7 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
PCDHB2Q9Y5E7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHB2Q9Y5E7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 AL512408.1-201ENST00000569378 2000 ntBASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 DPP3P2-201ENST00000416030 1696 ntBASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 KRT16P5-201ENST00000455284 522 ntBASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 AC113410.3-201ENST00000623366 203 ntBASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.7■■□□□ 1.06
PCDHB2Q9Y5E7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCDHB2Q9Y5E7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 KRT17P2-201ENST00000300992 1314 ntBASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHB2Q9Y5E7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 AC073912.3-201ENST00000624414 853 ntBASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCDHB2Q9Y5E7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHB2Q9Y5E7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms