Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP4S1Q9Y587 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4S1Q9Y587 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
AP4S1Q9Y587 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
AP4S1Q9Y587 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 MIR4767-201ENST00000582827 78 ntBASIC18.69■□□□□ 0.58
AP4S1Q9Y587 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 AC079598.2-202ENST00000546624 1451 ntBASIC18.69■□□□□ 0.58
AP4S1Q9Y587 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
AP4S1Q9Y587 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
AP4S1Q9Y587 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 AC120498.10-201ENST00000621827 505 ntBASIC18.67■□□□□ 0.58
AP4S1Q9Y587 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
AP4S1Q9Y587 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP4S1Q9Y587 AC104581.1-202ENST00000635932 2618 ntBASIC18.66■□□□□ 0.58
AP4S1Q9Y587 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms