Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.735e-7■■■■□ 21.5
MATR3P43243 GAB3-201ENST00000369568 3704 ntAPPRIS ALT2 TSL 214.07□□□□□ -0.165e-7■■■■□ 21.5
MATR3P43243 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.745e-7■■■■□ 21.5
MATR3P43243 GAB3-206ENST00000496390 4240 ntTSL 1 (best)6.7□□□□□ -1.345e-7■■■■□ 21.5
MATR3P43243 PDE4D-212ENST00000505453 1430 ntTSL 511.21□□□□□ -0.618e-7■■■■□ 21.5
MATR3P43243 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC7.44□□□□□ -1.228e-7■■■■□ 21.5
MATR3P43243 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.39□□□□□ -1.558e-7■■■■□ 21.5
MATR3P43243 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.38□□□□□ -1.391e-7■■■■□ 21.5
MATR3P43243 NHSL1-207ENST00000491526 506 ntAPPRIS ALT2 TSL 315.23■□□□□ 0.032e-6■■■■□ 21.5
MATR3P43243 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.436e-7■■■■□ 21.5
MATR3P43243 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC15.5■□□□□ 0.076e-7■■■■□ 21.5
MATR3P43243 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC15.14■□□□□ 0.016e-7■■■■□ 21.5
MATR3P43243 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.016e-7■■■■□ 21.5
MATR3P43243 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.76e-7■■■■□ 21.5
MATR3P43243 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -16e-7■■■■□ 21.5
MATR3P43243 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.57■□□□□ 0.085e-6■■■■□ 21.5
MATR3P43243 ZNF100-206ENST00000608416 1840 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.445e-6■■■■□ 21.5
MATR3P43243 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC10.07□□□□□ -0.85e-6■■■■□ 21.5
MATR3P43243 ZNF100-203ENST00000594401 548 ntTSL 46.88□□□□□ -1.315e-6■■■■□ 21.5
MATR3P43243 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.62□□□□□ -1.672e-6■■■■□ 21.5
MATR3P43243 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.082e-6■■■■□ 21.5
MATR3P43243 LNP1-202ENST00000466996 1723 ntTSL 510.96□□□□□ -0.652e-6■■■■□ 21.5
MATR3P43243 LNP1-203ENST00000489752 1813 ntTSL 5 BASIC9.68□□□□□ -0.862e-6■■■■□ 21.5
MATR3P43243 SHANK2-215ENST00000470759 762 ntTSL 520.63■□□□□ 0.892e-6■■■■□ 21.5
MATR3P43243 SHANK2-214ENST00000468619 2775 ntTSL 215.01□□□□□ -0.012e-6■■■■□ 21.5
MATR3P43243 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.411e-6■■■■□ 21.4
MATR3P43243 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.331e-6■■■■□ 21.4
MATR3P43243 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.231e-6■■■■□ 21.4
MATR3P43243 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.121e-6■■■■□ 21.4
MATR3P43243 MAP3K4-215ENST00000544041 5444 ntTSL 1 (best)15.64■□□□□ 0.091e-6■■■■□ 21.4
MATR3P43243 MAP3K4-207ENST00000490904 5451 ntTSL 1 (best)15.56■□□□□ 0.081e-6■■■■□ 21.4
MATR3P43243 KDM4C-204ENST00000420847 1064 ntTSL 510.4□□□□□ -0.742e-6■■■■□ 21.4
MATR3P43243 ZNF445-204ENST00000474600 877 ntTSL 1 (best)16.47■□□□□ 0.238e-7■■■■□ 21.4
MATR3P43243 DSCR4-201ENST00000328264 1098 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.524e-7■■■■□ 21.4
MATR3P43243 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.924e-7■■■■□ 21.4
MATR3P43243 AL365181.3-201ENST00000605886 3222 ntBASIC15.72■□□□□ 0.111e-8■■■■□ 21.4
MATR3P43243 MSI2-212ENST00000579590 452 ntTSL 55.01□□□□□ -1.611e-6■■■■□ 21.4
MATR3P43243 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.76■■■□□ 2.352e-6■■■■□ 21.4
MATR3P43243 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.98■■□□□ 1.912e-6■■■■□ 21.4
MATR3P43243 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.742e-6■■■■□ 21.4
MATR3P43243 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.76■■□□□ 1.552e-6■■■■□ 21.4
MATR3P43243 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.522e-6■■■■□ 21.4
MATR3P43243 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.352e-6■■■■□ 21.4
MATR3P43243 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.242e-6■■■■□ 21.4
MATR3P43243 PCSK6-208ENST00000559417 1035 ntTSL 519.95■□□□□ 0.782e-6■■■■□ 21.4
MATR3P43243 PCSK6-203ENST00000557794 1196 ntTSL 512.32□□□□□ -0.442e-6■■■■□ 21.4
MATR3P43243 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.44■□□□□ 0.381e-6■■■■□ 21.4
MATR3P43243 ABCA1-201ENST00000374733 923 ntTSL 2 BASIC11.34□□□□□ -0.591e-6■■■■□ 21.4
MATR3P43243 SLC39A11-216ENST00000583715 589 ntTSL 513.19□□□□□ -0.31e-6■■■■□ 21.4
MATR3P43243 SLC39A11-205ENST00000579319 439 ntTSL 311.92□□□□□ -0.51e-6■■■■□ 21.4
MATR3P43243 SLC39A11-211ENST00000581581 386 ntTSL 35.78□□□□□ -1.481e-6■■■■□ 21.4
MATR3P43243 UVSSA-202ENST00000389851 12605 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.581e-7■■■■□ 21.4
MATR3P43243 UVSSA-201ENST00000324803 4441 ntBASIC10.93□□□□□ -0.661e-7■■■■□ 21.4
MATR3P43243 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.83■□□□□ 0.285e-6■■■■□ 21.4
MATR3P43243 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.25e-6■■■■□ 21.4
MATR3P43243 ITGB1-215ENST00000488494 540 ntTSL 419.42■□□□□ 0.71e-6■■■■□ 21.4
MATR3P43243 ITGB1-210ENST00000474568 788 ntTSL 517.56■□□□□ 0.41e-6■■■■□ 21.4
MATR3P43243 ITGB1-211ENST00000475184 552 ntTSL 417.26■□□□□ 0.351e-6■■■■□ 21.4
MATR3P43243 ITGB1-204ENST00000417122 569 ntTSL 417.09■□□□□ 0.331e-6■■■■□ 21.4
MATR3P43243 ITGB1-218ENST00000528877 546 ntTSL 47.64□□□□□ -1.191e-6■■■■□ 21.4
MATR3P43243 ITGB1-203ENST00000414670 500 ntTSL 36.75□□□□□ -1.331e-6■■■■□ 21.4
MATR3P43243 ITGB1-219ENST00000534049 562 ntTSL 44.5□□□□□ -1.691e-6■■■■□ 21.4
MATR3P43243 ITGB1-212ENST00000480226 585 ntTSL 43.76□□□□□ -1.811e-6■■■■□ 21.4
MATR3P43243 ITGB1-206ENST00000437302 445 ntTSL 53.66□□□□□ -1.821e-6■■■■□ 21.4
MATR3P43243 ITGB1-213ENST00000484088 580 ntTSL 42.06□□□□□ -2.081e-6■■■■□ 21.4
MATR3P43243 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.227e-7■■■■□ 21.4
MATR3P43243 FGFR1OP-207ENST00000622353 3451 ntTSL 2 BASIC14.04□□□□□ -0.167e-7■■■■□ 21.4
MATR3P43243 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.927e-7■■■■□ 21.4
MATR3P43243 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.71□□□□□ -1.57e-7■■■■□ 21.4
MATR3P43243 SPPL3-208ENST00000543854 508 ntTSL 520.92■□□□□ 0.943e-6■■■■□ 21.4
MATR3P43243 SPPL3-207ENST00000543608 636 ntTSL 317.8■□□□□ 0.443e-6■■■■□ 21.4
MATR3P43243 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.243e-6■■■■□ 21.4
MATR3P43243 SPPL3-204ENST00000536996 763 ntTSL 515.77■□□□□ 0.123e-6■■■■□ 21.4
MATR3P43243 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.161e-6■■■■□ 21.4
MATR3P43243 EPS8-214ENST00000544064 577 ntTSL 423.28■■□□□ 1.322e-6■■■■□ 21.4
MATR3P43243 EPS8-205ENST00000536793 559 ntTSL 420.21■□□□□ 0.832e-6■■■■□ 21.4
MATR3P43243 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.572e-6■■■■□ 21.4
MATR3P43243 EPS8-206ENST00000536956 621 ntTSL 318.14■□□□□ 0.492e-6■■■■□ 21.4
MATR3P43243 EPS8-211ENST00000543468 3722 ntTSL 1 (best)14.17□□□□□ -0.142e-6■■■■□ 21.4
MATR3P43243 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.252e-6■■■■□ 21.4
MATR3P43243 EPS8-204ENST00000535752 543 ntTSL 44.69□□□□□ -1.662e-6■■■■□ 21.4
MATR3P43243 EPS8-210ENST00000543363 374 ntTSL 43.12□□□□□ -1.912e-6■■■■□ 21.4
MATR3P43243 EVI5-203ENST00000468580 654 ntTSL 54.7□□□□□ -1.665e-7■■■■□ 21.4
MATR3P43243 EVI5-205ENST00000491940 971 ntTSL 54.04□□□□□ -1.765e-7■■■■□ 21.4
MATR3P43243 EVI5-207ENST00000492613 495 ntTSL 32.99□□□□□ -1.935e-7■■■■□ 21.4
MATR3P43243 ASB1-206ENST00000469885 743 ntTSL 324.4■■□□□ 1.51e-6■■■■□ 21.4
MATR3P43243 RNF4-210ENST00000508235 603 ntTSL 316.42■□□□□ 0.222e-6■■■■□ 21.4
MATR3P43243 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.388e-7■■■■□ 21.4
MATR3P43243 ETV6-203ENST00000541426 572 ntTSL 419.13■□□□□ 0.652e-6■■■■□ 21.4
MATR3P43243 ETV6-204ENST00000544715 733 ntTSL 318.25■□□□□ 0.512e-6■■■■□ 21.4
MATR3P43243 ETV6-202ENST00000396373 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.42e-6■■■■□ 21.4
MATR3P43243 AC009054.2-201ENST00000561956 374 ntTSL 3 BASIC11.82□□□□□ -0.521e-8■■■■□ 21.4
MATR3P43243 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.066e-11■■■■□ 21.4
MATR3P43243 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.066e-11■■■■□ 21.4
MATR3P43243 KMT2C-212ENST00000558084 16862 ntTSL 1 (best)8.43□□□□□ -1.066e-11■■■■□ 21.4
MATR3P43243 MAN2A1-202ENST00000502261 448 ntTSL 53.94□□□□□ -1.786e-11■■■■□ 21.4
MATR3P43243 MAN2A1-205ENST00000508043 546 ntTSL 32.53□□□□□ -26e-11■■■■□ 21.4
MATR3P43243 RPS4Y1-203ENST00000477725 998 ntTSL 26.43□□□□□ -1.381e-6■■■■□ 21.4
MATR3P43243 RPS4Y1-204ENST00000515575 454 ntTSL 33.37□□□□□ -1.871e-6■■■■□ 21.4
MATR3P43243 RUNX1-216ENST00000482318 1710 ntTSL 1 (best)23.97■■□□□ 1.437e-7■■■■□ 21.4
Retrieved 100 of 16,209 protein–RNA pairs in 101.7 ms