RNA–Protein interactions for RNA: ENST00000489752.1

LNP1-203, Transcript of leukemia NUP98 fusion partner 1, humanhuman

TSL 5 BASIC

Gene LNP1, Length 1,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-203ENST00000489752 AEBP2Q6ZN18 517 aaPredicted RBP19.92■□□□□ 0.78
LNP1-203ENST00000489752 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
LNP1-203ENST00000489752 CHIC1Q5VXU3 224 aa19.5■□□□□ 0.71
LNP1-203ENST00000489752 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
LNP1-203ENST00000489752 CCDC180Q9P1Z9 1646 aa16.91■□□□□ 0.3
LNP1-203ENST00000489752 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
LNP1-203ENST00000489752 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
LNP1-203ENST00000489752 DCAF1Q9Y4B6 1507 aa16.2■□□□□ 0.18
LNP1-203ENST00000489752 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.16
LNP1-203ENST00000489752 ABCC9O60706 1549 aa16.05■□□□□ 0.16
LNP1-203ENST00000489752 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
LNP1-203ENST00000489752 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
LNP1-203ENST00000489752 PLPPR3Q6T4P5 718 aa15.83■□□□□ 0.12
LNP1-203ENST00000489752 SUPT5HO00267 1087 aaKnown RBP15.64■□□□□ 0.09
LNP1-203ENST00000489752 NACADO15069 1562 aa15.63■□□□□ 0.09
LNP1-203ENST00000489752 FOXD1Q16676 465 aa15.61■□□□□ 0.09
LNP1-203ENST00000489752 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
LNP1-203ENST00000489752 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
LNP1-203ENST00000489752 RSF1Q96T23 1441 aaPredicted RBP15.27■□□□□ 0.04
LNP1-203ENST00000489752 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
LNP1-203ENST00000489752 PPP6R1Q9UPN7 881 aa15.17■□□□□ 0.02
LNP1-203ENST00000489752 UNC13AQ9UPW8 1703 aa15.13■□□□□ 0.01
LNP1-203ENST00000489752 ADRA2BP18089 450 aa15.13■□□□□ 0.01
LNP1-203ENST00000489752 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
LNP1-203ENST00000489752 CECR2Q9BXF3 1484 aa15.1■□□□□ 0.01
LNP1-203ENST00000489752 MROH2BQ7Z745 1585 aa15.08■□□□□ 0.01
LNP1-203ENST00000489752 BAZ1AQ9NRL2 1556 aaPredicted RBP15.06■□□□□ 0
LNP1-203ENST00000489752 WIZO95785 1651 aa14.98□□□□□ -0.01
LNP1-203ENST00000489752 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
LNP1-203ENST00000489752 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
LNP1-203ENST00000489752 PABPN1Q86U42 306 aaKnown RBP eCLIP14.93□□□□□ -0.02
LNP1-203ENST00000489752 TOP2AP11388 1531 aaKnown RBP14.87□□□□□ -0.03
LNP1-203ENST00000489752 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
LNP1-203ENST00000489752 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
LNP1-203ENST00000489752 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
LNP1-203ENST00000489752 TRIM41Q8WV44 630 aa14.71□□□□□ -0.05
LNP1-203ENST00000489752 PIAS4Q8N2W9 510 aaPredicted RBP14.69□□□□□ -0.06
LNP1-203ENST00000489752 CCDC88BA6NC98 1476 aa14.68□□□□□ -0.06
LNP1-203ENST00000489752 LOC105371045A0A1W2PR82 267 aa14.59□□□□□ -0.07
LNP1-203ENST00000489752 ATAD2BQ9ULI0 1458 aa14.58□□□□□ -0.07
LNP1-203ENST00000489752 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.09
LNP1-203ENST00000489752 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.09
LNP1-203ENST00000489752 ABCC8Q09428 1581 aa14.48□□□□□ -0.09
LNP1-203ENST00000489752 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
LNP1-203ENST00000489752 HRCP23327 699 aa14.42□□□□□ -0.1
LNP1-203ENST00000489752 NCAPD3P42695 1498 aa14.41□□□□□ -0.1
LNP1-203ENST00000489752 FAM9AQ8IZU1 332 aaPredicted RBP14.41□□□□□ -0.1
LNP1-203ENST00000489752 EEA1Q15075 1411 aa14.38□□□□□ -0.11
LNP1-203ENST00000489752 WRNQ14191 1432 aaPredicted RBP eCLIP14.36□□□□□ -0.11
LNP1-203ENST00000489752 PCGF6Q9BYE7 350 aa14.33□□□□□ -0.12
LNP1-203ENST00000489752 SYNJ1O43426 1573 aa14.3□□□□□ -0.12
LNP1-203ENST00000489752 TRIM26Q12899 539 aaPredicted RBP14.28□□□□□ -0.12
LNP1-203ENST00000489752 SOGA1O94964 1423 aa14.28□□□□□ -0.12
LNP1-203ENST00000489752 TOP2BQ02880 1626 aa14.24□□□□□ -0.13
LNP1-203ENST00000489752 MSH5O43196 834 aa14.24□□□□□ -0.13
LNP1-203ENST00000489752 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
LNP1-203ENST00000489752 PRDM2Q13029 1718 aa14.21□□□□□ -0.14
LNP1-203ENST00000489752 TNIKQ9UKE5 1360 aa14.2□□□□□ -0.14
LNP1-203ENST00000489752 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
LNP1-203ENST00000489752 CFTRP13569 1480 aa14.19□□□□□ -0.14
LNP1-203ENST00000489752 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
LNP1-203ENST00000489752 KIF21BO75037 1637 aa14.19□□□□□ -0.14
LNP1-203ENST00000489752 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
LNP1-203ENST00000489752 CEP164Q9UPV0 1460 aa14.15□□□□□ -0.14
LNP1-203ENST00000489752 EHMT2Q96KQ7 1210 aa14.14□□□□□ -0.15
LNP1-203ENST00000489752 CEP162Q5TB80 1403 aa14.14□□□□□ -0.15
LNP1-203ENST00000489752 CUX1P39880 1505 aa14.09□□□□□ -0.15
LNP1-203ENST00000489752 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
LNP1-203ENST00000489752 ERICH3Q5RHP9 1530 aa14.03□□□□□ -0.16
LNP1-203ENST00000489752 UBTFP17480 764 aaKnown RBP14.01□□□□□ -0.17
LNP1-203ENST00000489752 PPP4R3CPQ6ZMV5 832 aa14□□□□□ -0.17
LNP1-203ENST00000489752 PRXQ9BXM0 1461 aa13.99□□□□□ -0.17
LNP1-203ENST00000489752 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
LNP1-203ENST00000489752 KIF27Q86VH2 1401 aa13.96□□□□□ -0.17
LNP1-203ENST00000489752 CLIP1P30622 1438 aa13.94□□□□□ -0.18
LNP1-203ENST00000489752 DNAJC5Q9H3Z4 198 aa13.93□□□□□ -0.18
LNP1-203ENST00000489752 ZEB1P37275 1124 aaPredicted RBP13.92□□□□□ -0.18
LNP1-203ENST00000489752 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
LNP1-203ENST00000489752 VPS8Q8N3P4 1428 aa13.9□□□□□ -0.18
LNP1-203ENST00000489752 CUX2O14529 1486 aa13.89□□□□□ -0.19
LNP1-203ENST00000489752 FANCD2Q9BXW9 1451 aa13.89□□□□□ -0.19
LNP1-203ENST00000489752 LAMC3Q9Y6N6 1575 aa13.87□□□□□ -0.19
LNP1-203ENST00000489752 KCNA4P22459 653 aa13.87□□□□□ -0.19
LNP1-203ENST00000489752 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
LNP1-203ENST00000489752 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
LNP1-203ENST00000489752 ERCC6Q03468 1493 aa13.85□□□□□ -0.19
LNP1-203ENST00000489752 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
LNP1-203ENST00000489752 IGF1RP08069 1367 aa13.79□□□□□ -0.2
LNP1-203ENST00000489752 NESP48681 1621 aa13.78□□□□□ -0.2
LNP1-203ENST00000489752 ABCA10Q8WWZ4 1543 aa13.78□□□□□ -0.2
LNP1-203ENST00000489752 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
LNP1-203ENST00000489752 POLA1P09884 1462 aaPredicted RBP13.76□□□□□ -0.21
LNP1-203ENST00000489752 WDR97A6NE52 1622 aa13.74□□□□□ -0.21
LNP1-203ENST00000489752 PDS5BQ9NTI5 1447 aa13.72□□□□□ -0.21
LNP1-203ENST00000489752 CUL7Q14999 1698 aa13.71□□□□□ -0.21
LNP1-203ENST00000489752 CARMIL1Q5VZK9 1371 aa13.71□□□□□ -0.21
LNP1-203ENST00000489752 ARHGAP35Q9NRY4 1499 aa13.71□□□□□ -0.21
LNP1-203ENST00000489752 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
LNP1-203ENST00000489752 MAPK8IP2Q13387 824 aaPredicted RBP13.7□□□□□ -0.22
LNP1-203ENST00000489752 APLP2Q06481 763 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms