RNA–Protein interactions for RNA: ENST00000466996.5

LNP1-202, Transcript of leukemia NUP98 fusion partner 1, humanhuman

TSL 5

Gene LNP1, Length 1,723 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LNP1-202ENST00000466996 NISCHQ9Y2I1 1504 aa21.99■■□□□ 1.11
LNP1-202ENST00000466996 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
LNP1-202ENST00000466996 ABCC9O60706 1549 aa18.78■□□□□ 0.6
LNP1-202ENST00000466996 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
LNP1-202ENST00000466996 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
LNP1-202ENST00000466996 DCAF1Q9Y4B6 1507 aa18.25■□□□□ 0.51
LNP1-202ENST00000466996 NACADO15069 1562 aa18.24■□□□□ 0.51
LNP1-202ENST00000466996 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
LNP1-202ENST00000466996 DCAF8L2P0C7V8 631 aa18.12■□□□□ 0.49
LNP1-202ENST00000466996 UNC13AQ9UPW8 1703 aa17.76■□□□□ 0.43
LNP1-202ENST00000466996 BICRAQ9NZM4 1560 aa17.7■□□□□ 0.42
LNP1-202ENST00000466996 SHROOM4Q9ULL8 1493 aa17.69■□□□□ 0.42
LNP1-202ENST00000466996 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
LNP1-202ENST00000466996 PABPN1Q86U42 306 aaKnown RBP eCLIP17.6■□□□□ 0.41
LNP1-202ENST00000466996 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
LNP1-202ENST00000466996 DNAJC5BQ9UF47 199 aa17.19■□□□□ 0.34
LNP1-202ENST00000466996 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
LNP1-202ENST00000466996 CECR2Q9BXF3 1484 aa17.11■□□□□ 0.33
LNP1-202ENST00000466996 CC2D2AQ9P2K1 1620 aa17.02■□□□□ 0.32
LNP1-202ENST00000466996 BAZ1AQ9NRL2 1556 aaPredicted RBP16.99■□□□□ 0.31
LNP1-202ENST00000466996 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
LNP1-202ENST00000466996 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
LNP1-202ENST00000466996 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
LNP1-202ENST00000466996 ATAD2BQ9ULI0 1458 aa16.89■□□□□ 0.29
LNP1-202ENST00000466996 NCAPD3P42695 1498 aa16.88■□□□□ 0.29
LNP1-202ENST00000466996 RSF1Q96T23 1441 aaPredicted RBP16.84■□□□□ 0.29
LNP1-202ENST00000466996 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
LNP1-202ENST00000466996 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
LNP1-202ENST00000466996 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
LNP1-202ENST00000466996 WIZO95785 1651 aa16.72■□□□□ 0.27
LNP1-202ENST00000466996 BAZ1BQ9UIG0 1483 aaKnown RBP16.69■□□□□ 0.26
LNP1-202ENST00000466996 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
LNP1-202ENST00000466996 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
LNP1-202ENST00000466996 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
LNP1-202ENST00000466996 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
LNP1-202ENST00000466996 NESP48681 1621 aa16.35■□□□□ 0.21
LNP1-202ENST00000466996 LAMC3Q9Y6N6 1575 aa16.33■□□□□ 0.21
LNP1-202ENST00000466996 CFTRP13569 1480 aa16.33■□□□□ 0.2
LNP1-202ENST00000466996 HRCP23327 699 aa16.29■□□□□ 0.2
LNP1-202ENST00000466996 LOC105371045A0A1W2PR82 267 aa16.27■□□□□ 0.19
LNP1-202ENST00000466996 PCGF6Q9BYE7 350 aa16.22■□□□□ 0.19
LNP1-202ENST00000466996 PDS5BQ9NTI5 1447 aa16.21■□□□□ 0.19
LNP1-202ENST00000466996 FANCD2Q9BXW9 1451 aa16.13■□□□□ 0.17
LNP1-202ENST00000466996 ERCC6Q03468 1493 aa16.12■□□□□ 0.17
LNP1-202ENST00000466996 TRIM41Q8WV44 630 aa16.11■□□□□ 0.17
LNP1-202ENST00000466996 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
LNP1-202ENST00000466996 PRDM2Q13029 1718 aa16.09■□□□□ 0.17
LNP1-202ENST00000466996 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
LNP1-202ENST00000466996 THOC2Q8NI27 1593 aaKnown RBP16.07■□□□□ 0.16
LNP1-202ENST00000466996 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.16
LNP1-202ENST00000466996 WDR62O43379 1518 aa16.01■□□□□ 0.15
LNP1-202ENST00000466996 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
LNP1-202ENST00000466996 TRIM26Q12899 539 aaPredicted RBP15.98■□□□□ 0.15
LNP1-202ENST00000466996 CUX2O14529 1486 aa15.98■□□□□ 0.15
LNP1-202ENST00000466996 FAM9AQ8IZU1 332 aaPredicted RBP15.95■□□□□ 0.14
LNP1-202ENST00000466996 TOPBP1Q92547 1522 aa15.91■□□□□ 0.14
LNP1-202ENST00000466996 ABCC8Q09428 1581 aa15.91■□□□□ 0.14
LNP1-202ENST00000466996 PPARGC1BQ86YN6 1023 aaKnown RBP15.9■□□□□ 0.14
LNP1-202ENST00000466996 DNMBPQ6XZF7 1577 aa15.89■□□□□ 0.13
LNP1-202ENST00000466996 CUX1P39880 1505 aa15.88■□□□□ 0.13
LNP1-202ENST00000466996 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
LNP1-202ENST00000466996 POLA1P09884 1462 aaPredicted RBP15.8■□□□□ 0.12
LNP1-202ENST00000466996 TOP2BQ02880 1626 aa15.77■□□□□ 0.12
LNP1-202ENST00000466996 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.12
LNP1-202ENST00000466996 SYNJ1O43426 1573 aa15.77■□□□□ 0.12
LNP1-202ENST00000466996 IFT140Q96RY7 1462 aa15.76■□□□□ 0.11
LNP1-202ENST00000466996 BIVM-ERCC5R4GMW8 1640 aa15.76■□□□□ 0.11
LNP1-202ENST00000466996 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
LNP1-202ENST00000466996 TARBP1Q13395 1621 aaKnown RBP15.75■□□□□ 0.11
LNP1-202ENST00000466996 RAD54L2Q9Y4B4 1467 aa15.71■□□□□ 0.11
LNP1-202ENST00000466996 SOGA1O94964 1423 aa15.71■□□□□ 0.1
LNP1-202ENST00000466996 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
LNP1-202ENST00000466996 ABCA10Q8WWZ4 1543 aa15.67■□□□□ 0.1
LNP1-202ENST00000466996 ZEB1P37275 1124 aaPredicted RBP15.65■□□□□ 0.1
LNP1-202ENST00000466996 WDR97A6NE52 1622 aa15.63■□□□□ 0.09
LNP1-202ENST00000466996 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.09
LNP1-202ENST00000466996 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
LNP1-202ENST00000466996 EIF4G3O43432 1585 aaKnown RBP15.59■□□□□ 0.09
LNP1-202ENST00000466996 EEA1Q15075 1411 aa15.58■□□□□ 0.08
LNP1-202ENST00000466996 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
LNP1-202ENST00000466996 CEP162Q5TB80 1403 aa15.54■□□□□ 0.08
LNP1-202ENST00000466996 GAPVD1Q14C86 1478 aa15.54■□□□□ 0.08
LNP1-202ENST00000466996 RUSC2Q8N2Y8 1516 aa15.52■□□□□ 0.08
LNP1-202ENST00000466996 TNIKQ9UKE5 1360 aa15.51■□□□□ 0.07
LNP1-202ENST00000466996 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
LNP1-202ENST00000466996 GOLGA3Q08378 1498 aa15.48■□□□□ 0.07
LNP1-202ENST00000466996 KIF27Q86VH2 1401 aa15.46■□□□□ 0.07
LNP1-202ENST00000466996 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.07
LNP1-202ENST00000466996 KIF21BO75037 1637 aa15.46■□□□□ 0.06
LNP1-202ENST00000466996 ERICH3Q5RHP9 1530 aa15.46■□□□□ 0.06
LNP1-202ENST00000466996 IGF1RP08069 1367 aa15.45■□□□□ 0.06
LNP1-202ENST00000466996 SNAPC4Q5SXM2 1469 aa15.44■□□□□ 0.06
LNP1-202ENST00000466996 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
LNP1-202ENST00000466996 PBRM1Q86U86 1689 aa15.43■□□□□ 0.06
LNP1-202ENST00000466996 SYNJ2O15056 1496 aa15.39■□□□□ 0.05
LNP1-202ENST00000466996 FHAD1B1AJZ9 1412 aa15.38■□□□□ 0.05
LNP1-202ENST00000466996 ADAMTS12P58397 1594 aa15.37■□□□□ 0.05
LNP1-202ENST00000466996 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
LNP1-202ENST00000466996 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
LNP1-202ENST00000466996 CHMP7Q8WUX9 453 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms