RNA–Protein interactions for RNA: ENST00000374733.1

ABCA1-201, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-201ENST00000374733 AEBP2Q6ZN18 517 aaPredicted RBP31.7■■■□□ 2.67
ABCA1-201ENST00000374733 CHIC1Q5VXU3 224 aa31.04■■■□□ 2.56
ABCA1-201ENST00000374733 NISCHQ9Y2I1 1504 aa27.82■■■□□ 2.04
ABCA1-201ENST00000374733 PHF23Q9BUL5 403 aaPredicted RBP27.22■■□□□ 1.95
ABCA1-201ENST00000374733 SENP3Q9H4L4 574 aaPredicted RBP27.05■■□□□ 1.92
ABCA1-201ENST00000374733 ABCC9O60706 1549 aa26.37■■□□□ 1.81
ABCA1-201ENST00000374733 DNAJC5BQ9UF47 199 aa25.52■■□□□ 1.68
ABCA1-201ENST00000374733 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
ABCA1-201ENST00000374733 PLPPR3Q6T4P5 718 aa25.26■■□□□ 1.63
ABCA1-201ENST00000374733 FOXD1Q16676 465 aa25.01■■□□□ 1.59
ABCA1-201ENST00000374733 RB1CC1Q8TDY2 1594 aa24.65■■□□□ 1.54
ABCA1-201ENST00000374733 PABPN1Q86U42 306 aaKnown RBP eCLIP24.37■■□□□ 1.49
ABCA1-201ENST00000374733 NACADO15069 1562 aa24.21■■□□□ 1.47
ABCA1-201ENST00000374733 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.46
ABCA1-201ENST00000374733 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
ABCA1-201ENST00000374733 PPP6R1Q9UPN7 881 aa24.01■■□□□ 1.43
ABCA1-201ENST00000374733 ADRA2BP18089 450 aa24■■□□□ 1.43
ABCA1-201ENST00000374733 BICRAQ9NZM4 1560 aa23.98■■□□□ 1.43
ABCA1-201ENST00000374733 DCAF8L2P0C7V8 631 aa23.91■■□□□ 1.42
ABCA1-201ENST00000374733 CECR2Q9BXF3 1484 aa23.83■■□□□ 1.41
ABCA1-201ENST00000374733 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
ABCA1-201ENST00000374733 PIAS4Q8N2W9 510 aaPredicted RBP23.62■■□□□ 1.37
ABCA1-201ENST00000374733 MYO15BQ96JP2 1530 aa23.5■■□□□ 1.35
ABCA1-201ENST00000374733 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
ABCA1-201ENST00000374733 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
ABCA1-201ENST00000374733 MSH5O43196 834 aa23.19■■□□□ 1.3
ABCA1-201ENST00000374733 SCRIBQ14160 1630 aa23.18■■□□□ 1.3
ABCA1-201ENST00000374733 CUX2O14529 1486 aa23.06■■□□□ 1.28
ABCA1-201ENST00000374733 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
ABCA1-201ENST00000374733 DCAF1Q9Y4B6 1507 aa22.87■■□□□ 1.25
ABCA1-201ENST00000374733 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
ABCA1-201ENST00000374733 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
ABCA1-201ENST00000374733 NESP48681 1621 aa22.39■■□□□ 1.17
ABCA1-201ENST00000374733 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
ABCA1-201ENST00000374733 NCAPD3P42695 1498 aa22.32■■□□□ 1.16
ABCA1-201ENST00000374733 PPP4R3CPQ6ZMV5 832 aa22.21■■□□□ 1.15
ABCA1-201ENST00000374733 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
ABCA1-201ENST00000374733 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
ABCA1-201ENST00000374733 SCAF1Q9H7N4 1312 aaKnown RBP22.15■■□□□ 1.14
ABCA1-201ENST00000374733 HMGXB3Q12766 1538 aa22.13■■□□□ 1.13
ABCA1-201ENST00000374733 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
ABCA1-201ENST00000374733 LAMC3Q9Y6N6 1575 aa22.04■■□□□ 1.12
ABCA1-201ENST00000374733 BAZ1AQ9NRL2 1556 aaPredicted RBP21.99■■□□□ 1.11
ABCA1-201ENST00000374733 SMARCA4P51532 1647 aa21.96■■□□□ 1.11
ABCA1-201ENST00000374733 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
ABCA1-201ENST00000374733 PDS5BQ9NTI5 1447 aa21.9■■□□□ 1.1
ABCA1-201ENST00000374733 MRC2Q9UBG0 1479 aa21.82■■□□□ 1.08
ABCA1-201ENST00000374733 WDR62O43379 1518 aa21.8■■□□□ 1.08
ABCA1-201ENST00000374733 OSCARQ8IYS5 282 aa21.8■■□□□ 1.08
ABCA1-201ENST00000374733 MAPK8IP2Q13387 824 aaPredicted RBP21.76■■□□□ 1.07
ABCA1-201ENST00000374733 RIMBP3CA6NJZ7 1639 aa21.76■■□□□ 1.07
ABCA1-201ENST00000374733 RIMBP3BA6NNM3 1639 aa21.76■■□□□ 1.07
ABCA1-201ENST00000374733 RIMBP3Q9UFD9 1639 aa21.76■■□□□ 1.07
ABCA1-201ENST00000374733 NCBP3Q53F19 620 aaKnown RBP21.72■■□□□ 1.07
ABCA1-201ENST00000374733 PEG3Q9GZU2 1588 aa21.7■■□□□ 1.06
ABCA1-201ENST00000374733 CNKSR2Q8WXI2 1034 aa21.64■■□□□ 1.05
ABCA1-201ENST00000374733 KCNA4P22459 653 aa21.61■■□□□ 1.05
ABCA1-201ENST00000374733 CADPSQ9ULU8 1353 aa21.61■■□□□ 1.05
ABCA1-201ENST00000374733 ARHGEF11O15085 1522 aa21.55■■□□□ 1.04
ABCA1-201ENST00000374733 DMRT2Q9Y5R5 561 aa21.55■■□□□ 1.04
ABCA1-201ENST00000374733 CEP164Q9UPV0 1460 aa21.55■■□□□ 1.04
ABCA1-201ENST00000374733 TRHP20396 242 aaPredicted RBP21.51■■□□□ 1.03
ABCA1-201ENST00000374733 MROH2BQ7Z745 1585 aa21.45■■□□□ 1.02
ABCA1-201ENST00000374733 FANCD2Q9BXW9 1451 aa21.43■■□□□ 1.02
ABCA1-201ENST00000374733 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
ABCA1-201ENST00000374733 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1
ABCA1-201ENST00000374733 NPM3O75607 178 aaKnown RBP21.28■■□□□ 1
ABCA1-201ENST00000374733 ARAP1Q96P48 1450 aa21.27■■□□□ 1
ABCA1-201ENST00000374733 ZNF608Q9ULD9 1512 aaPredicted RBP21.23■□□□□ 0.99
ABCA1-201ENST00000374733 RNF216Q9NWF9 866 aaPredicted RBP21.22■□□□□ 0.99
ABCA1-201ENST00000374733 WIZO95785 1651 aa21.2■□□□□ 0.98
ABCA1-201ENST00000374733 CFTRP13569 1480 aa21.18■□□□□ 0.98
ABCA1-201ENST00000374733 CHD1O14646 1710 aa21.17■□□□□ 0.98
ABCA1-201ENST00000374733 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
ABCA1-201ENST00000374733 HOXD11P31277 338 aaPredicted RBP21.11■□□□□ 0.97
ABCA1-201ENST00000374733 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
ABCA1-201ENST00000374733 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
ABCA1-201ENST00000374733 POTEDQ86YR6 584 aa21.03■□□□□ 0.96
ABCA1-201ENST00000374733 PRDM2Q13029 1718 aa21.02■□□□□ 0.96
ABCA1-201ENST00000374733 FBLN2P98095 1184 aa20.95■□□□□ 0.94
ABCA1-201ENST00000374733 TOPBP1Q92547 1522 aa20.92■□□□□ 0.94
ABCA1-201ENST00000374733 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.935e-6■□□□□ 10.9
ABCA1-201ENST00000374733 TOP2AP11388 1531 aaKnown RBP20.82■□□□□ 0.92
ABCA1-201ENST00000374733 CLASP1Q7Z460 1538 aa20.82■□□□□ 0.92
ABCA1-201ENST00000374733 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
ABCA1-201ENST00000374733 ILDR1Q86SU0 546 aaPredicted RBP20.8■□□□□ 0.92
ABCA1-201ENST00000374733 DNMBPQ6XZF7 1577 aa20.76■□□□□ 0.91
ABCA1-201ENST00000374733 ABCC8Q09428 1581 aa20.74■□□□□ 0.91
ABCA1-201ENST00000374733 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
ABCA1-201ENST00000374733 SNAPC4Q5SXM2 1469 aa20.68■□□□□ 0.9
ABCA1-201ENST00000374733 GAPVD1Q14C86 1478 aa20.66■□□□□ 0.9
ABCA1-201ENST00000374733 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
ABCA1-201ENST00000374733 POLA1P09884 1462 aaPredicted RBP20.64■□□□□ 0.89
ABCA1-201ENST00000374733 DCAF8L1A6NGE4 600 aa20.61■□□□□ 0.89
ABCA1-201ENST00000374733 CHMP7Q8WUX9 453 aaPredicted RBP20.6■□□□□ 0.89
ABCA1-201ENST00000374733 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
ABCA1-201ENST00000374733 TDRD9Q8NDG6 1382 aaKnown RBP20.59■□□□□ 0.89
ABCA1-201ENST00000374733 CCDC88BA6NC98 1476 aa20.56■□□□□ 0.88
ABCA1-201ENST00000374733 KIF13AQ9H1H9 1805 aa20.54■□□□□ 0.88
ABCA1-201ENST00000374733 MAGI1Q96QZ7 1491 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms