RNA–Protein interactions for RNA: ENST00000420847.2

KDM4C-204, Transcript of lysine demethylase 4C, humanhuman

TSL 5

Gene KDM4C, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-204ENST00000420847 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.3
KDM4C-204ENST00000420847 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
KDM4C-204ENST00000420847 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.14
KDM4C-204ENST00000420847 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
KDM4C-204ENST00000420847 ABCC9O60706 1549 aa20.29■□□□□ 0.84
KDM4C-204ENST00000420847 PHF23Q9BUL5 403 aaPredicted RBP19.67■□□□□ 0.74
KDM4C-204ENST00000420847 RB1CC1Q8TDY2 1594 aa19.52■□□□□ 0.71
KDM4C-204ENST00000420847 DCAF8L2P0C7V8 631 aa19.45■□□□□ 0.7
KDM4C-204ENST00000420847 NACADO15069 1562 aa19.44■□□□□ 0.7
KDM4C-204ENST00000420847 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
KDM4C-204ENST00000420847 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
KDM4C-204ENST00000420847 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
KDM4C-204ENST00000420847 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
KDM4C-204ENST00000420847 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
KDM4C-204ENST00000420847 SCRIBQ14160 1630 aa18.89■□□□□ 0.61
KDM4C-204ENST00000420847 BICRAQ9NZM4 1560 aa18.87■□□□□ 0.61
KDM4C-204ENST00000420847 DNAJC5BQ9UF47 199 aa18.85■□□□□ 0.61
KDM4C-204ENST00000420847 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
KDM4C-204ENST00000420847 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
KDM4C-204ENST00000420847 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
KDM4C-204ENST00000420847 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
KDM4C-204ENST00000420847 CC2D2AQ9P2K1 1620 aa18.37■□□□□ 0.53
KDM4C-204ENST00000420847 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
KDM4C-204ENST00000420847 SMARCA4P51532 1647 aa18.03■□□□□ 0.48
KDM4C-204ENST00000420847 BAZ1AQ9NRL2 1556 aaPredicted RBP18■□□□□ 0.47
KDM4C-204ENST00000420847 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
KDM4C-204ENST00000420847 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
KDM4C-204ENST00000420847 ATAD2BQ9ULI0 1458 aa17.89■□□□□ 0.45
KDM4C-204ENST00000420847 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
KDM4C-204ENST00000420847 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
KDM4C-204ENST00000420847 PEG3Q9GZU2 1588 aa17.82■□□□□ 0.44
KDM4C-204ENST00000420847 BAZ1BQ9UIG0 1483 aaKnown RBP17.8■□□□□ 0.44
KDM4C-204ENST00000420847 WIZO95785 1651 aa17.68■□□□□ 0.42
KDM4C-204ENST00000420847 ERCC6Q03468 1493 aa17.6■□□□□ 0.41
KDM4C-204ENST00000420847 RSF1Q96T23 1441 aaPredicted RBP17.56■□□□□ 0.4
KDM4C-204ENST00000420847 NESP48681 1621 aa17.51■□□□□ 0.39
KDM4C-204ENST00000420847 LAMC3Q9Y6N6 1575 aa17.51■□□□□ 0.39
KDM4C-204ENST00000420847 CUX2O14529 1486 aa17.5■□□□□ 0.39
KDM4C-204ENST00000420847 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
KDM4C-204ENST00000420847 PDS5BQ9NTI5 1447 aa17.43■□□□□ 0.38
KDM4C-204ENST00000420847 KIF21AQ7Z4S6 1674 aa17.39■□□□□ 0.37
KDM4C-204ENST00000420847 CADPSQ9ULU8 1353 aa17.39■□□□□ 0.37
KDM4C-204ENST00000420847 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
KDM4C-204ENST00000420847 FOXD1Q16676 465 aa17.33■□□□□ 0.36
KDM4C-204ENST00000420847 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
KDM4C-204ENST00000420847 ADRA2BP18089 450 aa17.28■□□□□ 0.36
KDM4C-204ENST00000420847 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
KDM4C-204ENST00000420847 CFTRP13569 1480 aa17.24■□□□□ 0.35
KDM4C-204ENST00000420847 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
KDM4C-204ENST00000420847 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
KDM4C-204ENST00000420847 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
KDM4C-204ENST00000420847 MRC2Q9UBG0 1479 aa17.2■□□□□ 0.34
KDM4C-204ENST00000420847 PPP6R1Q9UPN7 881 aa17.19■□□□□ 0.34
KDM4C-204ENST00000420847 WDR62O43379 1518 aa17.15■□□□□ 0.34
KDM4C-204ENST00000420847 SUPT5HO00267 1087 aaKnown RBP17.07■□□□□ 0.32
KDM4C-204ENST00000420847 URB2Q14146 1524 aaKnown RBP17.02■□□□□ 0.32
KDM4C-204ENST00000420847 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
KDM4C-204ENST00000420847 DNMBPQ6XZF7 1577 aa16.92■□□□□ 0.3
KDM4C-204ENST00000420847 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
KDM4C-204ENST00000420847 OSCARQ8IYS5 282 aa16.88■□□□□ 0.29
KDM4C-204ENST00000420847 IFT140Q96RY7 1462 aa16.84■□□□□ 0.29
KDM4C-204ENST00000420847 POLA1P09884 1462 aaPredicted RBP16.76■□□□□ 0.27
KDM4C-204ENST00000420847 EIF4G3O43432 1585 aaKnown RBP16.76■□□□□ 0.27
KDM4C-204ENST00000420847 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
KDM4C-204ENST00000420847 CUX1P39880 1505 aa16.75■□□□□ 0.27
KDM4C-204ENST00000420847 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
KDM4C-204ENST00000420847 FGD5Q6ZNL6 1462 aa16.73■□□□□ 0.27
KDM4C-204ENST00000420847 KCNA4P22459 653 aa16.71■□□□□ 0.27
KDM4C-204ENST00000420847 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
KDM4C-204ENST00000420847 SOGA1O94964 1423 aa16.67■□□□□ 0.26
KDM4C-204ENST00000420847 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
KDM4C-204ENST00000420847 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
KDM4C-204ENST00000420847 AQRO60306 1485 aaKnown RBP eCLIP16.63■□□□□ 0.25
KDM4C-204ENST00000420847 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
KDM4C-204ENST00000420847 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
KDM4C-204ENST00000420847 TOP2BQ02880 1626 aa16.6■□□□□ 0.25
KDM4C-204ENST00000420847 FBLN2P98095 1184 aa16.6■□□□□ 0.25
KDM4C-204ENST00000420847 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
KDM4C-204ENST00000420847 CHD1O14646 1710 aa16.59■□□□□ 0.25
KDM4C-204ENST00000420847 TDRD9Q8NDG6 1382 aaKnown RBP16.58■□□□□ 0.24
KDM4C-204ENST00000420847 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
KDM4C-204ENST00000420847 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
KDM4C-204ENST00000420847 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
KDM4C-204ENST00000420847 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
KDM4C-204ENST00000420847 ABCA5Q8WWZ7 1642 aa16.52■□□□□ 0.24
KDM4C-204ENST00000420847 GRIN2BQ13224 1484 aa16.52■□□□□ 0.23
KDM4C-204ENST00000420847 SNAPC4Q5SXM2 1469 aa16.52■□□□□ 0.23
KDM4C-204ENST00000420847 GAPVD1Q14C86 1478 aa16.5■□□□□ 0.23
KDM4C-204ENST00000420847 MAGI1Q96QZ7 1491 aaPredicted RBP16.5■□□□□ 0.23
KDM4C-204ENST00000420847 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
KDM4C-204ENST00000420847 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
KDM4C-204ENST00000420847 CYB5RLQ6IPT4 315 aa16.4■□□□□ 0.22
KDM4C-204ENST00000420847 RIMBP3CA6NJZ7 1639 aa16.39■□□□□ 0.21
KDM4C-204ENST00000420847 RIMBP3BA6NNM3 1639 aa16.39■□□□□ 0.21
KDM4C-204ENST00000420847 RIMBP3Q9UFD9 1639 aa16.39■□□□□ 0.21
KDM4C-204ENST00000420847 ADAMTS12P58397 1594 aa16.38■□□□□ 0.21
KDM4C-204ENST00000420847 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
KDM4C-204ENST00000420847 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
KDM4C-204ENST00000420847 PPP4R3CPQ6ZMV5 832 aa16.34■□□□□ 0.21
KDM4C-204ENST00000420847 CLASP1Q7Z460 1538 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms