RNA–Protein interactions for RNA: ENST00000467549.5

ROBO1-204, Transcript of roundabout guidance receptor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ROBO1, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROBO1-204ENST00000467549 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
ROBO1-204ENST00000467549 DCAF8L2P0C7V8 631 aa16.6■□□□□ 0.25
ROBO1-204ENST00000467549 SUPT5HO00267 1087 aaKnown RBP15.7■□□□□ 0.1
ROBO1-204ENST00000467549 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
ROBO1-204ENST00000467549 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.04
ROBO1-204ENST00000467549 APLP2Q06481 763 aa14.76□□□□□ -0.05
ROBO1-204ENST00000467549 TRIM41Q8WV44 630 aa14.7□□□□□ -0.06
ROBO1-204ENST00000467549 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
ROBO1-204ENST00000467549 ABCC9O60706 1549 aa14.57□□□□□ -0.08
ROBO1-204ENST00000467549 UBTFP17480 764 aaKnown RBP14.4□□□□□ -0.1
ROBO1-204ENST00000467549 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
ROBO1-204ENST00000467549 PCGF6Q9BYE7 350 aa14.31□□□□□ -0.12
ROBO1-204ENST00000467549 RANGAP1P46060 587 aaPredicted RBP14.3□□□□□ -0.12
ROBO1-204ENST00000467549 ZCCHC6Q5VYS8 1495 aaKnown RBP14.26□□□□□ -0.13
ROBO1-204ENST00000467549 TTBK1Q5TCY1 1321 aaPredicted RBP14.25□□□□□ -0.13
ROBO1-204ENST00000467549 CHIC1Q5VXU3 224 aa14.25□□□□□ -0.13
ROBO1-204ENST00000467549 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
ROBO1-204ENST00000467549 ZEB1P37275 1124 aaPredicted RBP14.22□□□□□ -0.13
ROBO1-204ENST00000467549 ATP1B4Q9UN42 357 aaPredicted RBP14.22□□□□□ -0.13
ROBO1-204ENST00000467549 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
ROBO1-204ENST00000467549 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
ROBO1-204ENST00000467549 TRIM26Q12899 539 aaPredicted RBP14.01□□□□□ -0.17
ROBO1-204ENST00000467549 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
ROBO1-204ENST00000467549 LOC105371045A0A1W2PR82 267 aa13.97□□□□□ -0.17
ROBO1-204ENST00000467549 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
ROBO1-204ENST00000467549 NACADO15069 1562 aa13.87□□□□□ -0.19
ROBO1-204ENST00000467549 PPARGC1BQ86YN6 1023 aaKnown RBP13.87□□□□□ -0.19
ROBO1-204ENST00000467549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.86□□□□□ -0.19
ROBO1-204ENST00000467549 HNRNPUL2Q1KMD3 747 aaKnown RBP13.86□□□□□ -0.19
ROBO1-204ENST00000467549 DCAF1Q9Y4B6 1507 aa13.8□□□□□ -0.2
ROBO1-204ENST00000467549 CENPBP07199 599 aaPredicted RBP13.79□□□□□ -0.2
ROBO1-204ENST00000467549 ITGAEP38570 1179 aa13.72□□□□□ -0.21
ROBO1-204ENST00000467549 CSRNP3Q8WYN3 585 aa13.71□□□□□ -0.21
ROBO1-204ENST00000467549 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
ROBO1-204ENST00000467549 HRCP23327 699 aa13.66□□□□□ -0.22
ROBO1-204ENST00000467549 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
ROBO1-204ENST00000467549 FBLN2P98095 1184 aa13.55□□□□□ -0.24
ROBO1-204ENST00000467549 FAM50AQ14320 339 aaKnown RBP13.55□□□□□ -0.24
ROBO1-204ENST00000467549 BAZ1AQ9NRL2 1556 aaPredicted RBP13.5□□□□□ -0.25
ROBO1-204ENST00000467549 MYO15BQ96JP2 1530 aa13.49□□□□□ -0.25
ROBO1-204ENST00000467549 NEFLP07196 543 aa13.48□□□□□ -0.25
ROBO1-204ENST00000467549 BAZ1BQ9UIG0 1483 aaKnown RBP13.47□□□□□ -0.25
ROBO1-204ENST00000467549 CDK11AQ9UQ88 783 aaPredicted RBP13.44□□□□□ -0.26
ROBO1-204ENST00000467549 EEA1Q15075 1411 aa13.43□□□□□ -0.26
ROBO1-204ENST00000467549 TRIM52Q96A61 297 aa13.41□□□□□ -0.26
ROBO1-204ENST00000467549 P3H3Q8IVL6 736 aa13.4□□□□□ -0.26
ROBO1-204ENST00000467549 YTHDC1Q96MU7 727 aaKnown RBP13.39□□□□□ -0.27
ROBO1-204ENST00000467549 POLR3GLQ9BT43 218 aa13.36□□□□□ -0.27
ROBO1-204ENST00000467549 WRNQ14191 1432 aaPredicted RBP eCLIP13.35□□□□□ -0.27
ROBO1-204ENST00000467549 CECR2Q9BXF3 1484 aa13.34□□□□□ -0.27
ROBO1-204ENST00000467549 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
ROBO1-204ENST00000467549 GOLGA3Q08378 1498 aa13.26□□□□□ -0.29
ROBO1-204ENST00000467549 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
ROBO1-204ENST00000467549 DIEXFQ68CQ4 756 aaKnown RBP13.25□□□□□ -0.29
ROBO1-204ENST00000467549 CLIP1P30622 1438 aa13.24□□□□□ -0.29
ROBO1-204ENST00000467549 SMARCA2P51531 1590 aa13.24□□□□□ -0.29
ROBO1-204ENST00000467549 ARID3CA6NKF2 412 aa13.23□□□□□ -0.29
ROBO1-204ENST00000467549 CHMP7Q8WUX9 453 aaPredicted RBP13.23□□□□□ -0.29
ROBO1-204ENST00000467549 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
ROBO1-204ENST00000467549 MROH2BQ7Z745 1585 aa13.21□□□□□ -0.29
ROBO1-204ENST00000467549 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
ROBO1-204ENST00000467549 ZNF777Q9ULD5 760 aaPredicted RBP13.2□□□□□ -0.3
ROBO1-204ENST00000467549 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
ROBO1-204ENST00000467549 TNIKQ9UKE5 1360 aa13.15□□□□□ -0.3
ROBO1-204ENST00000467549 MTUS2Q5JR59 1369 aa13.15□□□□□ -0.3
ROBO1-204ENST00000467549 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
ROBO1-204ENST00000467549 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
ROBO1-204ENST00000467549 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
ROBO1-204ENST00000467549 ZNF326Q5BKZ1 582 aaKnown RBP13.12□□□□□ -0.31
ROBO1-204ENST00000467549 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
ROBO1-204ENST00000467549 ERCC6Q03468 1493 aa13.1□□□□□ -0.31
ROBO1-204ENST00000467549 CNGB1Q14028 1251 aaPredicted RBP13.1□□□□□ -0.31
ROBO1-204ENST00000467549 ANP32CO43423 234 aa13.09□□□□□ -0.31
ROBO1-204ENST00000467549 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
ROBO1-204ENST00000467549 ACIN1Q9UKV3 1341 aaKnown RBP13.07□□□□□ -0.32
ROBO1-204ENST00000467549 TSPY4P0CV99 314 aa13.06□□□□□ -0.32
ROBO1-204ENST00000467549 TSPY10P0CW01 314 aa13.06□□□□□ -0.32
ROBO1-204ENST00000467549 PDS5BQ9NTI5 1447 aa13.05□□□□□ -0.32
ROBO1-204ENST00000467549 TONSLQ96HA7 1378 aa13.05□□□□□ -0.32
ROBO1-204ENST00000467549 CUX2O14529 1486 aa13.02□□□□□ -0.33
ROBO1-204ENST00000467549 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
ROBO1-204ENST00000467549 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
ROBO1-204ENST00000467549 ATAD2BQ9ULI0 1458 aa13.01□□□□□ -0.33
ROBO1-204ENST00000467549 CARMIL1Q5VZK9 1371 aa13□□□□□ -0.33
ROBO1-204ENST00000467549 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
ROBO1-204ENST00000467549 WIZO95785 1651 aa12.99□□□□□ -0.33
ROBO1-204ENST00000467549 FHAD1B1AJZ9 1412 aa12.98□□□□□ -0.33
ROBO1-204ENST00000467549 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
ROBO1-204ENST00000467549 CHIC2Q9UKJ5 165 aa12.97□□□□□ -0.33
ROBO1-204ENST00000467549 SOGA1O94964 1423 aa12.96□□□□□ -0.34
ROBO1-204ENST00000467549 BCANQ96GW7 911 aa12.92□□□□□ -0.34
ROBO1-204ENST00000467549 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
ROBO1-204ENST00000467549 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
ROBO1-204ENST00000467549 STAG3Q9UJ98 1225 aa12.89□□□□□ -0.35
ROBO1-204ENST00000467549 CFDP1Q9UEE9 299 aaPredicted RBP12.88□□□□□ -0.35
ROBO1-204ENST00000467549 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.87□□□□□ -0.353e-7■■□□□ 11.8
ROBO1-204ENST00000467549 CHGAP10645 457 aaKnown RBP12.87□□□□□ -0.35
ROBO1-204ENST00000467549 NEFMP07197 916 aa12.86□□□□□ -0.35
ROBO1-204ENST00000467549 KCNH8Q96L42 1107 aa12.86□□□□□ -0.35
ROBO1-204ENST00000467549 VPS8Q8N3P4 1428 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms