Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 AL355802.2-201ENST00000402069 882 ntBASIC19.07■□□□□ 0.64
PRAMEF4O60810 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.07■□□□□ 0.64
PRAMEF4O60810 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.07■□□□□ 0.64
PRAMEF4O60810 AC018553.1-201ENST00000616682 1458 ntBASIC19.07■□□□□ 0.64
PRAMEF4O60810 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.07■□□□□ 0.64
PRAMEF4O60810 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PRAMEF4O60810 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PRAMEF4O60810 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 AC116351.2-201ENST00000606540 1585 ntBASIC19.06■□□□□ 0.64
PRAMEF4O60810 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 PNMA6B-201ENST00000538162 1200 ntBASIC19.06■□□□□ 0.64
PRAMEF4O60810 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.06■□□□□ 0.64
PRAMEF4O60810 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
PRAMEF4O60810 AC092368.3-202ENST00000574180 1591 ntBASIC19.06■□□□□ 0.64
PRAMEF4O60810 AC116562.4-201ENST00000641316 2276 ntBASIC19.05■□□□□ 0.64
PRAMEF4O60810 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 AC060766.5-201ENST00000590539 871 ntBASIC19.05■□□□□ 0.64
PRAMEF4O60810 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.05■□□□□ 0.64
PRAMEF4O60810 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PRAMEF4O60810 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.04■□□□□ 0.64
PRAMEF4O60810 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PRAMEF4O60810 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF4O60810 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PRAMEF4O60810 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF4O60810 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF4O60810 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF4O60810 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF4O60810 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF4O60810 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PRAMEF4O60810 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEF4O60810 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.03■□□□□ 0.64
PRAMEF4O60810 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms