Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.35□□□□□ -1.552e-31■■■□□ 15.4
LARP4Q71RC2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.66□□□□□ -1.822e-31■■■□□ 15.4
LARP4Q71RC2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.6■■■□□ 2.332e-20■■■□□ 15.3
LARP4Q71RC2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.212e-20■■■□□ 15.3
LARP4Q71RC2 NT5DC2-215ENST00000492555 2004 ntTSL 1 (best)17.86■□□□□ 0.452e-20■■■□□ 15.3
LARP4Q71RC2 NT5DC2-210ENST00000479024 1714 ntTSL 214.17□□□□□ -0.142e-20■■■□□ 15.3
LARP4Q71RC2 NT5DC2-204ENST00000462261 1619 ntTSL 213.51□□□□□ -0.252e-20■■■□□ 15.3
LARP4Q71RC2 NT5DC2-205ENST00000463947 670 ntTSL 312.41□□□□□ -0.422e-20■■■□□ 15.3
LARP4Q71RC2 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.522e-20■■■□□ 15.3
LARP4Q71RC2 NT5DC2-207ENST00000469616 453 ntTSL 27.28□□□□□ -1.242e-20■■■□□ 15.3
LARP4Q71RC2 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.672e-10■■■□□ 15.3
LARP4Q71RC2 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC10.85□□□□□ -0.672e-10■■■□□ 15.3
LARP4Q71RC2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.511e-7■■■□□ 15.3
LARP4Q71RC2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.06■□□□□ 0.321e-7■■■□□ 15.3
LARP4Q71RC2 TYMS-205ENST00000581920 886 ntTSL 56.87□□□□□ -1.311e-7■■■□□ 15.3
LARP4Q71RC2 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC11.53□□□□□ -0.562e-6■■■□□ 15.3
LARP4Q71RC2 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC10.55□□□□□ -0.722e-6■■■□□ 15.3
LARP4Q71RC2 LINC00470-203ENST00000577867 1211 ntTSL 1 (best)10.11□□□□□ -0.792e-6■■■□□ 15.3
LARP4Q71RC2 LINC00470-204ENST00000578835 674 ntTSL 28.1□□□□□ -1.112e-6■■■□□ 15.3
LARP4Q71RC2 LINC00470-206ENST00000581212 721 ntTSL 1 (best)5.96□□□□□ -1.462e-6■■■□□ 15.3
LARP4Q71RC2 LINC00470-209ENST00000582862 424 ntTSL 1 (best)5.96□□□□□ -1.462e-6■■■□□ 15.3
LARP4Q71RC2 LINC00470-202ENST00000577403 251 ntTSL 1 (best)3.94□□□□□ -1.782e-6■■■□□ 15.3
LARP4Q71RC2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.59■□□□□ 0.578e-7■■■□□ 15.3
LARP4Q71RC2 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.458e-7■■■□□ 15.3
LARP4Q71RC2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.48e-7■■■□□ 15.3
LARP4Q71RC2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.148e-7■■■□□ 15.3
LARP4Q71RC2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.148e-7■■■□□ 15.3
LARP4Q71RC2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.128e-7■■■□□ 15.3
LARP4Q71RC2 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.018e-7■■■□□ 15.3
LARP4Q71RC2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.84e-6■■■□□ 15.3
LARP4Q71RC2 RPL35A-204ENST00000442341 517 ntTSL 34.46□□□□□ -1.72e-18■■■□□ 15.3
LARP4Q71RC2 FUS-212ENST00000569760 639 ntTSL 221.38■■□□□ 1.012e-11■■■□□ 15.3
LARP4Q71RC2 FUS-204ENST00000483853 778 ntTSL 219.17■□□□□ 0.662e-11■■■□□ 15.3
LARP4Q71RC2 MRPS16-204ENST00000473427 612 ntTSL 317.23■□□□□ 0.351e-6■■■□□ 15.3
LARP4Q71RC2 MRPS16-203ENST00000471251 658 ntTSL 26.62□□□□□ -1.351e-6■■■□□ 15.3
LARP4Q71RC2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.3■□□□□ 0.22e-8■■■□□ 15.3
LARP4Q71RC2 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.37□□□□□ -0.272e-8■■■□□ 15.3
LARP4Q71RC2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.312e-8■■■□□ 15.3
LARP4Q71RC2 PSME1-210ENST00000561435 945 ntTSL 2 BASIC10.12□□□□□ -0.792e-8■■■□□ 15.3
LARP4Q71RC2 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.468e-17■■■□□ 15.3
LARP4Q71RC2 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.468e-17■■■□□ 15.3
LARP4Q71RC2 NDUFS8-213ENST00000531282 536 ntTSL 216.85■□□□□ 0.295e-7■■■□□ 15.3
LARP4Q71RC2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.524e-7■■■□□ 15.3
LARP4Q71RC2 FKBP2-206ENST00000541388 705 ntTSL 517.18■□□□□ 0.344e-7■■■□□ 15.3
LARP4Q71RC2 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.044e-7■■■□□ 15.3
LARP4Q71RC2 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.44e-7■■■□□ 15.3
LARP4Q71RC2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.668e-7■■■□□ 15.3
LARP4Q71RC2 MRPL40-202ENST00000443660 954 ntTSL 213.34□□□□□ -0.278e-7■■■□□ 15.3
LARP4Q71RC2 MRPL40-203ENST00000471259 942 ntTSL 210.18□□□□□ -0.788e-7■■■□□ 15.3
LARP4Q71RC2 TRIR-204ENST00000591254 988 ntTSL 223.33■■□□□ 1.331e-7■■■□□ 15.3
LARP4Q71RC2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.17■□□□□ 0.981e-7■■■□□ 15.3
LARP4Q71RC2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.74■□□□□ 0.911e-7■■■□□ 15.3
LARP4Q71RC2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.831e-7■■■□□ 15.3
LARP4Q71RC2 RTEL1-TNFRSF6B-201ENST00000480273 5751 ntTSL 216.23■□□□□ 0.191e-6■■■□□ 15.3
LARP4Q71RC2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.87■□□□□ 0.131e-6■■■□□ 15.3
LARP4Q71RC2 RTEL1-TNFRSF6B-203ENST00000492259 4824 ntAPPRIS ALT2 TSL 514.63□□□□□ -0.071e-6■■■□□ 15.3
LARP4Q71RC2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.5□□□□□ -0.091e-6■■■□□ 15.3
LARP4Q71RC2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.39□□□□□ -0.111e-6■■■□□ 15.3
LARP4Q71RC2 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.141e-6■■■□□ 15.3
LARP4Q71RC2 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.43□□□□□ -0.421e-6■■■□□ 15.3
LARP4Q71RC2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.027e-33■■■□□ 15.3
LARP4Q71RC2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.92■■□□□ 1.18e-6■■■□□ 15.3
LARP4Q71RC2 ARHGAP4-224ENST00000494813 1939 ntTSL 521.46■■□□□ 1.032e-7■■■□□ 15.3
LARP4Q71RC2 ATP6V0B-210ENST00000498208 419 ntTSL 520.94■□□□□ 0.942e-7■■■□□ 15.3
LARP4Q71RC2 MRPL4-209ENST00000591054 777 ntTSL 320.91■□□□□ 0.948e-6■■■□□ 15.3
LARP4Q71RC2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.82e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.8■□□□□ 0.67e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-225ENST00000636808 2639 ntTSL 518.79■□□□□ 0.67e-14■■■□□ 15.3
LARP4Q71RC2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.78■□□□□ 0.62e-7■■■□□ 15.3
LARP4Q71RC2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.7■□□□□ 0.588e-6■■■□□ 15.3
LARP4Q71RC2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.562e-7■■■□□ 15.3
LARP4Q71RC2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.552e-7■■■□□ 15.3
LARP4Q71RC2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.542e-7■■■□□ 15.3
LARP4Q71RC2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.532e-7■■■□□ 15.3
LARP4Q71RC2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.85■□□□□ 0.458e-6■■■□□ 15.3
LARP4Q71RC2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.83■□□□□ 0.442e-7■■■□□ 15.3
LARP4Q71RC2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.442e-7■■■□□ 15.3
LARP4Q71RC2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.422e-7■■■□□ 15.3
LARP4Q71RC2 PLXNB1-209ENST00000466353 626 ntTSL 317.06■□□□□ 0.322e-7■■■□□ 15.3
LARP4Q71RC2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.81■□□□□ 0.282e-7■■■□□ 15.3
LARP4Q71RC2 NAA10-209ENST00000466877 1080 ntTSL 1 (best)16.36■□□□□ 0.212e-7■■■□□ 15.3
LARP4Q71RC2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.22e-7■■■□□ 15.3
LARP4Q71RC2 ATP6V0B-202ENST00000461670 530 ntTSL 515.91■□□□□ 0.142e-7■■■□□ 15.3
LARP4Q71RC2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.082e-7■■■□□ 15.3
LARP4Q71RC2 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.28■□□□□ 0.042e-7■■■□□ 15.3
LARP4Q71RC2 NAA10-215ENST00000484950 873 ntTSL 214.63□□□□□ -0.072e-7■■■□□ 15.3
LARP4Q71RC2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.082e-7■■■□□ 15.3
LARP4Q71RC2 NAA10-214ENST00000482485 1075 ntTSL 214.12□□□□□ -0.152e-7■■■□□ 15.3
LARP4Q71RC2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.153e-9■■■□□ 15.3
LARP4Q71RC2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.67□□□□□ -0.222e-7■■■□□ 15.3
LARP4Q71RC2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.67□□□□□ -0.222e-7■■■□□ 15.3
LARP4Q71RC2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.232e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.237e-14■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.267e-14■■■□□ 15.3
LARP4Q71RC2 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC13.01□□□□□ -0.338e-6■■■□□ 15.3
LARP4Q71RC2 MRPL4-208ENST00000590702 876 ntTSL 512.98□□□□□ -0.338e-6■■■□□ 15.3
LARP4Q71RC2 ZDHHC18-204ENST00000488397 1275 ntTSL 212.87□□□□□ -0.352e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-226ENST00000636872 2747 ntTSL 512.84□□□□□ -0.357e-14■■■□□ 15.3
LARP4Q71RC2 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.382e-7■■■□□ 15.3
LARP4Q71RC2 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC12.64□□□□□ -0.397e-14■■■□□ 15.3
Retrieved 100 of 15,922 protein–RNA pairs in 120.8 ms