RNA–Protein interactions for RNA: ENST00000591054.5

MRPL4-209, Transcript of mitochondrial ribosomal protein L4, humanhuman

TSL 3

Gene MRPL4, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL4-209ENST00000591054 NISCHQ9Y2I1 1504 aa53.23■■■■■ 6.11
MRPL4-209ENST00000591054 CCDC180Q9P1Z9 1646 aa47.19■■■■■ 5.15
MRPL4-209ENST00000591054 ABCC9O60706 1549 aa45.47■■■■■ 4.87
MRPL4-209ENST00000591054 ZCCHC6Q5VYS8 1495 aaKnown RBP44.48■■■■■ 4.71
MRPL4-209ENST00000591054 NACADO15069 1562 aa44.21■■■■■ 4.67
MRPL4-209ENST00000591054 MYO15BQ96JP2 1530 aa44.18■■■■■ 4.66
MRPL4-209ENST00000591054 DCAF1Q9Y4B6 1507 aa44.16■■■■■ 4.66
MRPL4-209ENST00000591054 RB1CC1Q8TDY2 1594 aa44.11■■■■■ 4.65
MRPL4-209ENST00000591054 DCAF8L2P0C7V8 631 aa44.04■■■■■ 4.64
MRPL4-209ENST00000591054 UNC13AQ9UPW8 1703 aa43.1■■■■■ 4.49
MRPL4-209ENST00000591054 SCRIBQ14160 1630 aa42.97■■■■■ 4.47
MRPL4-209ENST00000591054 BICRAQ9NZM4 1560 aa42.71■■■■■ 4.43
MRPL4-209ENST00000591054 PABPN1Q86U42 306 aaKnown RBP eCLIP42.5■■■■■ 4.39
MRPL4-209ENST00000591054 SHROOM4Q9ULL8 1493 aa42.47■■■■■ 4.39
MRPL4-209ENST00000591054 EIF4G1Q04637 1599 aaKnown RBP41.55■■■■■ 4.24
MRPL4-209ENST00000591054 CECR2Q9BXF3 1484 aa41.32■■■■■ 4.2
MRPL4-209ENST00000591054 BAZ1AQ9NRL2 1556 aaPredicted RBP41.26■■■■■ 4.2
MRPL4-209ENST00000591054 CC2D2AQ9P2K1 1620 aa41.23■■■■■ 4.19
MRPL4-209ENST00000591054 SMARCA4P51532 1647 aa41.21■■■■■ 4.19
MRPL4-209ENST00000591054 DNAJC5BQ9UF47 199 aa41.16■■■■■ 4.18
MRPL4-209ENST00000591054 MROH2BQ7Z745 1585 aa40.99■■■■■ 4.15
MRPL4-209ENST00000591054 SMARCA2P51531 1590 aa40.86■■■■■ 4.13
MRPL4-209ENST00000591054 PEG3Q9GZU2 1588 aa40.86■■■■■ 4.13
MRPL4-209ENST00000591054 ATAD2BQ9ULI0 1458 aa40.82■■■■■ 4.12
MRPL4-209ENST00000591054 NCAPD3P42695 1498 aa40.74■■■■■ 4.11
MRPL4-209ENST00000591054 RSF1Q96T23 1441 aaPredicted RBP40.71■■■■■ 4.11
MRPL4-209ENST00000591054 HMGXB3Q12766 1538 aa40.65■■■■■ 4.1
MRPL4-209ENST00000591054 WIZO95785 1651 aa40.57■■■■■ 4.09
MRPL4-209ENST00000591054 BAZ1BQ9UIG0 1483 aaKnown RBP40.52■■■■■ 4.08
MRPL4-209ENST00000591054 TOP2AP11388 1531 aaKnown RBP40.25■■■■■ 4.03
MRPL4-209ENST00000591054 SUPT5HO00267 1087 aaKnown RBP39.94■■■■□ 3.98
MRPL4-209ENST00000591054 CCDC88BA6NC98 1476 aa39.69■■■■□ 3.94
MRPL4-209ENST00000591054 LAMC3Q9Y6N6 1575 aa39.62■■■■□ 3.93
MRPL4-209ENST00000591054 CADPSQ9ULU8 1353 aa39.55■■■■□ 3.92
MRPL4-209ENST00000591054 NESP48681 1621 aa39.5■■■■□ 3.91
MRPL4-209ENST00000591054 CFTRP13569 1480 aa39.46■■■■□ 3.91
MRPL4-209ENST00000591054 PRDM2Q13029 1718 aa39.3■■■■□ 3.88
MRPL4-209ENST00000591054 PDS5BQ9NTI5 1447 aa39.3■■■■□ 3.88
MRPL4-209ENST00000591054 ERCC6Q03468 1493 aa39.2■■■■□ 3.87
MRPL4-209ENST00000591054 KIF21AQ7Z4S6 1674 aa39.13■■■■□ 3.86
MRPL4-209ENST00000591054 FANCD2Q9BXW9 1451 aa39.1■■■■□ 3.85
MRPL4-209ENST00000591054 CEP164Q9UPV0 1460 aa39.03■■■■□ 3.84
MRPL4-209ENST00000591054 THOC2Q8NI27 1593 aaKnown RBP38.91■■■■□ 3.82
MRPL4-209ENST00000591054 MRC2Q9UBG0 1479 aa38.86■■■■□ 3.81
MRPL4-209ENST00000591054 WDR62O43379 1518 aa38.75■■■■□ 3.79
MRPL4-209ENST00000591054 CUX2O14529 1486 aa38.67■■■■□ 3.78
MRPL4-209ENST00000591054 URB2Q14146 1524 aaKnown RBP38.66■■■■□ 3.78
MRPL4-209ENST00000591054 ABCC8Q09428 1581 aa38.64■■■■□ 3.78
MRPL4-209ENST00000591054 DNMBPQ6XZF7 1577 aa38.58■■■■□ 3.77
MRPL4-209ENST00000591054 TOPBP1Q92547 1522 aa38.54■■■■□ 3.76
MRPL4-209ENST00000591054 CUX1P39880 1505 aa38.43■■■■□ 3.74
MRPL4-209ENST00000591054 WRNQ14191 1432 aaPredicted RBP eCLIP38.39■■■■□ 3.74
MRPL4-209ENST00000591054 BIVM-ERCC5R4GMW8 1640 aa38.31■■■■□ 3.72
MRPL4-209ENST00000591054 TOP2BQ02880 1626 aa38.3■■■■□ 3.72
MRPL4-209ENST00000591054 SYNJ1O43426 1573 aa38.27■■■■□ 3.72
MRPL4-209ENST00000591054 POLA1P09884 1462 aaPredicted RBP38.25■■■■□ 3.71
MRPL4-209ENST00000591054 FGD5Q6ZNL6 1462 aa38.22■■■■□ 3.71
MRPL4-209ENST00000591054 IFT140Q96RY7 1462 aa38.2■■■■□ 3.71
MRPL4-209ENST00000591054 TARBP1Q13395 1621 aaKnown RBP38.1■■■■□ 3.69
MRPL4-209ENST00000591054 SOGA1O94964 1423 aa38.06■■■■□ 3.68
MRPL4-209ENST00000591054 RAD54L2Q9Y4B4 1467 aa38.01■■■■□ 3.67
MRPL4-209ENST00000591054 WDR97A6NE52 1622 aa37.96■■■■□ 3.67
MRPL4-209ENST00000591054 ABCA10Q8WWZ4 1543 aa37.92■■■■□ 3.66
MRPL4-209ENST00000591054 ZNF608Q9ULD9 1512 aaPredicted RBP37.89■■■■□ 3.66
MRPL4-209ENST00000591054 EIF4G3O43432 1585 aaKnown RBP37.85■■■■□ 3.65
MRPL4-209ENST00000591054 TRIM41Q8WV44 630 aa37.77■■■■□ 3.64
MRPL4-209ENST00000591054 ABCA5Q8WWZ7 1642 aa37.75■■■■□ 3.63
MRPL4-209ENST00000591054 TDRD9Q8NDG6 1382 aaKnown RBP37.74■■■■□ 3.63
MRPL4-209ENST00000591054 AQRO60306 1485 aaKnown RBP eCLIP37.73■■■■□ 3.63
MRPL4-209ENST00000591054 GAPVD1Q14C86 1478 aa37.67■■■■□ 3.62
MRPL4-209ENST00000591054 CHIC1Q5VXU3 224 aa37.64■■■■□ 3.62
MRPL4-209ENST00000591054 GRIN2BQ13224 1484 aa37.61■■■■□ 3.61
MRPL4-209ENST00000591054 PBRM1Q86U86 1689 aa37.6■■■■□ 3.61
MRPL4-209ENST00000591054 KIF27Q86VH2 1401 aa37.57■■■■□ 3.6
MRPL4-209ENST00000591054 ERICH3Q5RHP9 1530 aa37.51■■■■□ 3.59
MRPL4-209ENST00000591054 MAGI1Q96QZ7 1491 aaPredicted RBP37.49■■■■□ 3.59
MRPL4-209ENST00000591054 SNAPC4Q5SXM2 1469 aa37.45■■■■□ 3.59
MRPL4-209ENST00000591054 ADAMTS12P58397 1594 aa37.34■■■■□ 3.57
MRPL4-209ENST00000591054 SYNJ2O15056 1496 aa37.31■■■■□ 3.56
MRPL4-209ENST00000591054 IGF1RP08069 1367 aa37.29■■■■□ 3.56
MRPL4-209ENST00000591054 CUL7Q14999 1698 aa37.29■■■■□ 3.56
MRPL4-209ENST00000591054 FHAD1B1AJZ9 1412 aa37.27■■■■□ 3.56
MRPL4-209ENST00000591054 RUSC2Q8N2Y8 1516 aa37.27■■■■□ 3.56
MRPL4-209ENST00000591054 CHD1O14646 1710 aa37.27■■■■□ 3.56
MRPL4-209ENST00000591054 EEA1Q15075 1411 aa37.26■■■■□ 3.55
MRPL4-209ENST00000591054 CHMP7Q8WUX9 453 aaPredicted RBP37.16■■■■□ 3.54
MRPL4-209ENST00000591054 GRIN2AQ12879 1464 aa37.13■■■■□ 3.53
MRPL4-209ENST00000591054 FBLN2P98095 1184 aa37.11■■■■□ 3.53
MRPL4-209ENST00000591054 CARMIL1Q5VZK9 1371 aa37.1■■■■□ 3.53
MRPL4-209ENST00000591054 OSCARQ8IYS5 282 aa37.06■■■■□ 3.52
MRPL4-209ENST00000591054 CSRNP3Q8WYN3 585 aa37■■■■□ 3.51
MRPL4-209ENST00000591054 DNAJC5Q9H3Z4 198 aa36.98■■■■□ 3.51
MRPL4-209ENST00000591054 PRXQ9BXM0 1461 aa36.98■■■■□ 3.51
MRPL4-209ENST00000591054 RAPGEF2Q9Y4G8 1499 aa36.97■■■■□ 3.51
MRPL4-209ENST00000591054 NUP160Q12769 1436 aa36.95■■■■□ 3.51
MRPL4-209ENST00000591054 CEP170Q5SW79 1584 aa36.91■■■■□ 3.5
MRPL4-209ENST00000591054 CLASP1Q7Z460 1538 aa36.89■■■■□ 3.5
MRPL4-209ENST00000591054 FAM9AQ8IZU1 332 aaPredicted RBP36.87■■■■□ 3.49
MRPL4-209ENST00000591054 KIF21BO75037 1637 aa36.82■■■■□ 3.49
MRPL4-209ENST00000591054 KIAA0586Q9BVV6 1533 aa36.72■■■■□ 3.47
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms