RNA–Protein interactions for RNA: ENST00000581920.1

TYMS-205, Transcript of thymidylate synthetase, humanhuman

TSL 5

Gene TYMS, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-205ENST00000581920 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
TYMS-205ENST00000581920 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
TYMS-205ENST00000581920 PHF23Q9BUL5 403 aaPredicted RBP21.03■□□□□ 0.96
TYMS-205ENST00000581920 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
TYMS-205ENST00000581920 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
TYMS-205ENST00000581920 FOXD1Q16676 465 aa19.62■□□□□ 0.73
TYMS-205ENST00000581920 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
TYMS-205ENST00000581920 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
TYMS-205ENST00000581920 ADRA2BP18089 450 aa18.65■□□□□ 0.58
TYMS-205ENST00000581920 ABCC9O60706 1549 aa18.56■□□□□ 0.56
TYMS-205ENST00000581920 PIAS4Q8N2W9 510 aaPredicted RBP18.39■□□□□ 0.53
TYMS-205ENST00000581920 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
TYMS-205ENST00000581920 MSH5O43196 834 aa18.08■□□□□ 0.48
TYMS-205ENST00000581920 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
TYMS-205ENST00000581920 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
TYMS-205ENST00000581920 NACADO15069 1562 aa17.28■□□□□ 0.36
TYMS-205ENST00000581920 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
TYMS-205ENST00000581920 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
TYMS-205ENST00000581920 MAPK8IP2Q13387 824 aaPredicted RBP17.06■□□□□ 0.32
TYMS-205ENST00000581920 DCAF8L2P0C7V8 631 aa17.03■□□□□ 0.32
TYMS-205ENST00000581920 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
TYMS-205ENST00000581920 MYO15BQ96JP2 1530 aa16.94■□□□□ 0.3
TYMS-205ENST00000581920 BICRAQ9NZM4 1560 aa16.94■□□□□ 0.3
TYMS-205ENST00000581920 PPP4R3CPQ6ZMV5 832 aa16.92■□□□□ 0.3
TYMS-205ENST00000581920 SCAF1Q9H7N4 1312 aaKnown RBP16.86■□□□□ 0.29
TYMS-205ENST00000581920 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
TYMS-205ENST00000581920 CECR2Q9BXF3 1484 aa16.81■□□□□ 0.28
TYMS-205ENST00000581920 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
TYMS-205ENST00000581920 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
TYMS-205ENST00000581920 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
TYMS-205ENST00000581920 EIF4G1Q04637 1599 aaKnown RBP16.62■□□□□ 0.25
TYMS-205ENST00000581920 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
TYMS-205ENST00000581920 ZCCHC6Q5VYS8 1495 aaKnown RBP16.47■□□□□ 0.23
TYMS-205ENST00000581920 SCRIBQ14160 1630 aa16.45■□□□□ 0.22
TYMS-205ENST00000581920 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
TYMS-205ENST00000581920 CUX2O14529 1486 aa16.28■□□□□ 0.2
TYMS-205ENST00000581920 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
TYMS-205ENST00000581920 HOXD11P31277 338 aaPredicted RBP16.24■□□□□ 0.19
TYMS-205ENST00000581920 KCNA4P22459 653 aa16.22■□□□□ 0.19
TYMS-205ENST00000581920 RNF216Q9NWF9 866 aaPredicted RBP16.2■□□□□ 0.18
TYMS-205ENST00000581920 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
TYMS-205ENST00000581920 ERCC6Q03468 1493 aa16.13■□□□□ 0.17
TYMS-205ENST00000581920 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
TYMS-205ENST00000581920 NCAPD3P42695 1498 aa15.96■□□□□ 0.14
TYMS-205ENST00000581920 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
TYMS-205ENST00000581920 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
TYMS-205ENST00000581920 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
TYMS-205ENST00000581920 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
TYMS-205ENST00000581920 NESP48681 1621 aa15.78■□□□□ 0.12
TYMS-205ENST00000581920 THOC2Q8NI27 1593 aaKnown RBP15.75■□□□□ 0.11
TYMS-205ENST00000581920 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
TYMS-205ENST00000581920 BAZ1BQ9UIG0 1483 aaKnown RBP15.67■□□□□ 0.1
TYMS-205ENST00000581920 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
TYMS-205ENST00000581920 PDS5BQ9NTI5 1447 aa15.64■□□□□ 0.09
TYMS-205ENST00000581920 BAZ1AQ9NRL2 1556 aaPredicted RBP15.58■□□□□ 0.08
TYMS-205ENST00000581920 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
TYMS-205ENST00000581920 KIF21AQ7Z4S6 1674 aa15.53■□□□□ 0.08
TYMS-205ENST00000581920 RNF39Q9H2S5 420 aa15.52■□□□□ 0.08
TYMS-205ENST00000581920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.074e-9■■□□□ 12.2
TYMS-205ENST00000581920 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
TYMS-205ENST00000581920 WDR62O43379 1518 aa15.47■□□□□ 0.07
TYMS-205ENST00000581920 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.07
TYMS-205ENST00000581920 OSCARQ8IYS5 282 aa15.43■□□□□ 0.06
TYMS-205ENST00000581920 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
TYMS-205ENST00000581920 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
TYMS-205ENST00000581920 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
TYMS-205ENST00000581920 MROH2BQ7Z745 1585 aa15.34■□□□□ 0.05
TYMS-205ENST00000581920 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
TYMS-205ENST00000581920 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.03
TYMS-205ENST00000581920 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
TYMS-205ENST00000581920 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
TYMS-205ENST00000581920 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.03
TYMS-205ENST00000581920 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.03
TYMS-205ENST00000581920 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.03
TYMS-205ENST00000581920 CFTRP13569 1480 aa15.18■□□□□ 0.02
TYMS-205ENST00000581920 ARHGEF11O15085 1522 aa15.16■□□□□ 0.02
TYMS-205ENST00000581920 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
TYMS-205ENST00000581920 WIZO95785 1651 aa15.09■□□□□ 0.01
TYMS-205ENST00000581920 IFT140Q96RY7 1462 aa15.08■□□□□ 0
TYMS-205ENST00000581920 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
TYMS-205ENST00000581920 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
TYMS-205ENST00000581920 ZNF608Q9ULD9 1512 aaPredicted RBP15.02□□□□□ -0.01
TYMS-205ENST00000581920 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
TYMS-205ENST00000581920 ARAP1Q96P48 1450 aa14.97□□□□□ -0.01
TYMS-205ENST00000581920 RSF1Q96T23 1441 aaPredicted RBP14.97□□□□□ -0.01
TYMS-205ENST00000581920 TOP2AP11388 1531 aaKnown RBP14.97□□□□□ -0.01
TYMS-205ENST00000581920 ZBTB22O15209 634 aa14.96□□□□□ -0.01
TYMS-205ENST00000581920 FOXD4L1Q9NU39 408 aa14.93□□□□□ -0.02
TYMS-205ENST00000581920 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
TYMS-205ENST00000581920 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
TYMS-205ENST00000581920 TOPBP1Q92547 1522 aa14.91□□□□□ -0.02
TYMS-205ENST00000581920 PRDM2Q13029 1718 aa14.89□□□□□ -0.03
TYMS-205ENST00000581920 CAPN15O75808 1086 aa14.88□□□□□ -0.03
TYMS-205ENST00000581920 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
TYMS-205ENST00000581920 FBLN2P98095 1184 aa14.85□□□□□ -0.03
TYMS-205ENST00000581920 CHD1O14646 1710 aa14.85□□□□□ -0.03
TYMS-205ENST00000581920 DNMBPQ6XZF7 1577 aa14.83□□□□□ -0.04
TYMS-205ENST00000581920 AQRO60306 1485 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■■■■ 34.6
TYMS-205ENST00000581920 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
TYMS-205ENST00000581920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms