RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 NISCHQ9Y2I1 1504 aa37.58■■■■□ 3.61
MRPL40-202ENST00000443660 ABCC9O60706 1549 aa34.41■■■■□ 3.1
MRPL40-202ENST00000443660 CCDC180Q9P1Z9 1646 aa33.82■■■■□ 3
MRPL40-202ENST00000443660 DNAJC5BQ9UF47 199 aa32.73■■■□□ 2.83
MRPL40-202ENST00000443660 RB1CC1Q8TDY2 1594 aa32.52■■■□□ 2.8
MRPL40-202ENST00000443660 NACADO15069 1562 aa32.19■■■□□ 2.74
MRPL40-202ENST00000443660 DCAF8L2P0C7V8 631 aa32.17■■■□□ 2.74
MRPL40-202ENST00000443660 PABPN1Q86U42 306 aaKnown RBP eCLIP32.06■■■□□ 2.72
MRPL40-202ENST00000443660 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
MRPL40-202ENST00000443660 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
MRPL40-202ENST00000443660 BICRAQ9NZM4 1560 aa31.51■■■□□ 2.63
MRPL40-202ENST00000443660 SHROOM4Q9ULL8 1493 aa31.11■■■□□ 2.57
MRPL40-202ENST00000443660 CECR2Q9BXF3 1484 aa31.06■■■□□ 2.56
MRPL40-202ENST00000443660 ZCCHC6Q5VYS8 1495 aaKnown RBP31.01■■■□□ 2.55
MRPL40-202ENST00000443660 DCAF1Q9Y4B6 1507 aa30.99■■■□□ 2.55
MRPL40-202ENST00000443660 CC2D2AQ9P2K1 1620 aa30.98■■■□□ 2.55
MRPL40-202ENST00000443660 SCRIBQ14160 1630 aa30.84■■■□□ 2.53
MRPL40-202ENST00000443660 EIF4G1Q04637 1599 aaKnown RBP30.82■■■□□ 2.52
MRPL40-202ENST00000443660 DNAJC5Q9H3Z4 198 aa30.46■■■□□ 2.47
MRPL40-202ENST00000443660 CUX2O14529 1486 aa29.84■■■□□ 2.37
MRPL40-202ENST00000443660 ERCC6Q03468 1493 aa29.8■■■□□ 2.36
MRPL40-202ENST00000443660 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
MRPL40-202ENST00000443660 ATAD2BQ9ULI0 1458 aa29.58■■■□□ 2.33
MRPL40-202ENST00000443660 SMARCA2P51531 1590 aa29.47■■■□□ 2.31
MRPL40-202ENST00000443660 HMGXB3Q12766 1538 aa29.41■■■□□ 2.3
MRPL40-202ENST00000443660 NESP48681 1621 aa29.39■■■□□ 2.3
MRPL40-202ENST00000443660 SMARCA4P51532 1647 aa29.36■■■□□ 2.29
MRPL40-202ENST00000443660 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
MRPL40-202ENST00000443660 BAZ1AQ9NRL2 1556 aaPredicted RBP29.21■■■□□ 2.27
MRPL40-202ENST00000443660 LAMC3Q9Y6N6 1575 aa29.11■■■□□ 2.25
MRPL40-202ENST00000443660 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
MRPL40-202ENST00000443660 PEG3Q9GZU2 1588 aa29.07■■■□□ 2.24
MRPL40-202ENST00000443660 PDS5BQ9NTI5 1447 aa29.07■■■□□ 2.24
MRPL40-202ENST00000443660 TRIM41Q8WV44 630 aa28.97■■■□□ 2.23
MRPL40-202ENST00000443660 MROH2BQ7Z745 1585 aa28.94■■■□□ 2.22
MRPL40-202ENST00000443660 KIF21AQ7Z4S6 1674 aa28.89■■■□□ 2.21
MRPL40-202ENST00000443660 CADPSQ9ULU8 1353 aa28.88■■■□□ 2.21
MRPL40-202ENST00000443660 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
MRPL40-202ENST00000443660 WDR62O43379 1518 aa28.65■■■□□ 2.18
MRPL40-202ENST00000443660 CEP164Q9UPV0 1460 aa28.57■■■□□ 2.16
MRPL40-202ENST00000443660 OSCARQ8IYS5 282 aa28.56■■■□□ 2.16
MRPL40-202ENST00000443660 WIZO95785 1651 aa28.52■■■□□ 2.16
MRPL40-202ENST00000443660 FANCD2Q9BXW9 1451 aa28.5■■■□□ 2.15
MRPL40-202ENST00000443660 CFTRP13569 1480 aa28.4■■■□□ 2.14
MRPL40-202ENST00000443660 URB2Q14146 1524 aaKnown RBP28.25■■■□□ 2.11
MRPL40-202ENST00000443660 RSF1Q96T23 1441 aaPredicted RBP28.22■■■□□ 2.11
MRPL40-202ENST00000443660 TOP2AP11388 1531 aaKnown RBP28.16■■■□□ 2.1
MRPL40-202ENST00000443660 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
MRPL40-202ENST00000443660 RIMBP3CA6NJZ7 1639 aa28.02■■■□□ 2.08
MRPL40-202ENST00000443660 RIMBP3BA6NNM3 1639 aa28.02■■■□□ 2.08
MRPL40-202ENST00000443660 RIMBP3Q9UFD9 1639 aa28.02■■■□□ 2.08
MRPL40-202ENST00000443660 ZNF608Q9ULD9 1512 aaPredicted RBP27.99■■■□□ 2.07
MRPL40-202ENST00000443660 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
MRPL40-202ENST00000443660 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
MRPL40-202ENST00000443660 CYB5RLQ6IPT4 315 aa27.91■■■□□ 2.06
MRPL40-202ENST00000443660 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
MRPL40-202ENST00000443660 ABCC8Q09428 1581 aa27.86■■■□□ 2.05
MRPL40-202ENST00000443660 PRDM2Q13029 1718 aa27.86■■■□□ 2.05
MRPL40-202ENST00000443660 TRHP20396 242 aaPredicted RBP27.8■■■□□ 2.04
MRPL40-202ENST00000443660 FBLN2P98095 1184 aa27.78■■■□□ 2.04
MRPL40-202ENST00000443660 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
MRPL40-202ENST00000443660 AQRO60306 1485 aaKnown RBP eCLIP27.74■■■□□ 2.033e-10■■■■■ 43
MRPL40-202ENST00000443660 DNMBPQ6XZF7 1577 aa27.71■■■□□ 2.03
MRPL40-202ENST00000443660 ARAP1Q96P48 1450 aa27.61■■■□□ 2.01
MRPL40-202ENST00000443660 TARBP1Q13395 1621 aaKnown RBP27.6■■■□□ 2.01
MRPL40-202ENST00000443660 CHD1O14646 1710 aa27.58■■■□□ 2.01
MRPL40-202ENST00000443660 POLA1P09884 1462 aaPredicted RBP27.57■■■□□ 2
MRPL40-202ENST00000443660 TDRD9Q8NDG6 1382 aaKnown RBP27.53■■■□□ 2
MRPL40-202ENST00000443660 SOGA1O94964 1423 aa27.52■■■□□ 2
MRPL40-202ENST00000443660 RAD54L2Q9Y4B4 1467 aa27.5■■□□□ 1.99
MRPL40-202ENST00000443660 CHMP7Q8WUX9 453 aaPredicted RBP27.49■■□□□ 1.99
MRPL40-202ENST00000443660 SNAPC4Q5SXM2 1469 aa27.39■■□□□ 1.98
MRPL40-202ENST00000443660 AEBP2Q6ZN18 517 aaPredicted RBP27.36■■□□□ 1.97
MRPL40-202ENST00000443660 FGD5Q6ZNL6 1462 aa27.33■■□□□ 1.97
MRPL40-202ENST00000443660 SYNJ1O43426 1573 aa27.32■■□□□ 1.96
MRPL40-202ENST00000443660 MAGI1Q96QZ7 1491 aaPredicted RBP27.32■■□□□ 1.96
MRPL40-202ENST00000443660 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
MRPL40-202ENST00000443660 WDR97A6NE52 1622 aa27.31■■□□□ 1.96
MRPL40-202ENST00000443660 GRIN2BQ13224 1484 aa27.3■■□□□ 1.96
MRPL40-202ENST00000443660 SYNJ2O15056 1496 aa27.25■■□□□ 1.95
MRPL40-202ENST00000443660 CUX1P39880 1505 aa27.2■■□□□ 1.94
MRPL40-202ENST00000443660 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
MRPL40-202ENST00000443660 ABCA10Q8WWZ4 1543 aa27■■□□□ 1.91
MRPL40-202ENST00000443660 PBRM1Q86U86 1689 aa26.99■■□□□ 1.91
MRPL40-202ENST00000443660 ABCA5Q8WWZ7 1642 aa26.91■■□□□ 1.9
MRPL40-202ENST00000443660 GRIN2AQ12879 1464 aa26.91■■□□□ 1.9
MRPL40-202ENST00000443660 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
MRPL40-202ENST00000443660 ERCC6L2Q5T890 1561 aa26.85■■□□□ 1.89
MRPL40-202ENST00000443660 NUP160Q12769 1436 aa26.83■■□□□ 1.89
MRPL40-202ENST00000443660 CEP170Q5SW79 1584 aa26.81■■□□□ 1.88
MRPL40-202ENST00000443660 FHAD1B1AJZ9 1412 aa26.79■■□□□ 1.88
MRPL40-202ENST00000443660 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
MRPL40-202ENST00000443660 ADAMTS12P58397 1594 aa26.75■■□□□ 1.87
MRPL40-202ENST00000443660 JPH4Q96JJ6 628 aa26.7■■□□□ 1.86
MRPL40-202ENST00000443660 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
MRPL40-202ENST00000443660 PRG4Q92954 1404 aaPredicted RBP26.68■■□□□ 1.86
MRPL40-202ENST00000443660 NPM1P06748 294 aaKnown RBP eCLIP26.67■■□□□ 1.86
MRPL40-202ENST00000443660 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
MRPL40-202ENST00000443660 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
MRPL40-202ENST00000443660 FAM69CQ0P6D2 419 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms