Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SDHDO14521 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.16■□□□□ 0.66
SDHDO14521 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.16■□□□□ 0.66
SDHDO14521 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
SDHDO14521 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 AL162412.1-201ENST00000567129 965 ntBASIC19.16■□□□□ 0.66
SDHDO14521 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.16■□□□□ 0.66
SDHDO14521 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SDHDO14521 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SDHDO14521 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SDHDO14521 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
SDHDO14521 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.15■□□□□ 0.66
SDHDO14521 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 MIR638-201ENST00000385237 100 ntBASIC19.15■□□□□ 0.66
SDHDO14521 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.15■□□□□ 0.66
SDHDO14521 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.15■□□□□ 0.66
SDHDO14521 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SDHDO14521 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SDHDO14521 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.15■□□□□ 0.66
SDHDO14521 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SDHDO14521 KRT8P20-201ENST00000423953 1409 ntBASIC19.15■□□□□ 0.66
SDHDO14521 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.15■□□□□ 0.66
SDHDO14521 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.15■□□□□ 0.66
SDHDO14521 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SDHDO14521 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.15■□□□□ 0.66
SDHDO14521 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SDHDO14521 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SDHDO14521 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SDHDO14521 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SDHDO14521 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.14■□□□□ 0.65
SDHDO14521 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.14■□□□□ 0.65
SDHDO14521 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 AC007322.4-201ENST00000509611 723 ntBASIC19.14■□□□□ 0.65
SDHDO14521 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.14■□□□□ 0.65
SDHDO14521 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SDHDO14521 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.14■□□□□ 0.65
SDHDO14521 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.14■□□□□ 0.65
SDHDO14521 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SDHDO14521 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
SDHDO14521 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SDHDO14521 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHDO14521 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.13■□□□□ 0.65
SDHDO14521 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.13■□□□□ 0.65
SDHDO14521 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.13■□□□□ 0.65
SDHDO14521 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.13■□□□□ 0.65
SDHDO14521 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SDHDO14521 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.13■□□□□ 0.65
SDHDO14521 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SDHDO14521 LINC01465-201ENST00000408887 1940 ntBASIC19.13■□□□□ 0.65
SDHDO14521 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SDHDO14521 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SDHDO14521 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms