Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TRBV20-1A0A075B6N2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 SIRPAP1-201ENST00000448467 1770 ntBASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
TRBV20-1A0A075B6N2 AC124067.4-201ENST00000519691 2379 ntBASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 AC009053.2-201ENST00000563701 2365 ntBASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRBV20-1A0A075B6N2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRBV20-1A0A075B6N2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
TRBV20-1A0A075B6N2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
TRBV20-1A0A075B6N2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms