Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 RGS12-221ENST00000512990 328 ntTSL 512.35□□□□□ -0.437e-12■□□□□ 9.8
PRPF8Q6P2Q9 PTPRF-214ENST00000496043 415 ntTSL 510.84□□□□□ -0.677e-12■□□□□ 9.8
PRPF8Q6P2Q9 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC10.38□□□□□ -0.757e-12■□□□□ 9.8
PRPF8Q6P2Q9 PTPRF-213ENST00000481019 459 ntTSL 310.31□□□□□ -0.767e-12■□□□□ 9.8
PRPF8Q6P2Q9 SEC23B-207ENST00000474619 232 ntTSL 510.3□□□□□ -0.767e-12■□□□□ 9.8
PRPF8Q6P2Q9 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.937e-12■□□□□ 9.8
PRPF8Q6P2Q9 NCKIPSD-202ENST00000413374 725 ntTSL 38.46□□□□□ -1.067e-12■□□□□ 9.8
PRPF8Q6P2Q9 ARPC5-205ENST00000602490 2985 nt4.43□□□□□ -1.77e-12■□□□□ 9.8
PRPF8Q6P2Q9 ARPC5-204ENST00000462965 2455 ntTSL 22.85□□□□□ -1.957e-12■□□□□ 9.8
PRPF8Q6P2Q9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.263e-6■□□□□ 9.8
PRPF8Q6P2Q9 CD151-210ENST00000526661 894 ntTSL 218.8■□□□□ 0.68e-8■□□□□ 9.7
PRPF8Q6P2Q9 CD151-211ENST00000526693 771 ntTSL 316.37■□□□□ 0.218e-8■□□□□ 9.7
PRPF8Q6P2Q9 CD151-204ENST00000524748 793 ntTSL 515.91■□□□□ 0.148e-8■□□□□ 9.7
PRPF8Q6P2Q9 CD151-212ENST00000527341 797 ntTSL 315.91■□□□□ 0.148e-8■□□□□ 9.7
PRPF8Q6P2Q9 CD151-215ENST00000529810 608 ntTSL 314.88□□□□□ -0.038e-8■□□□□ 9.7
PRPF8Q6P2Q9 CD151-219ENST00000531999 580 ntTSL 313.9□□□□□ -0.188e-8■□□□□ 9.7
PRPF8Q6P2Q9 CD151-208ENST00000525868 541 ntTSL 412.7□□□□□ -0.388e-8■□□□□ 9.7
PRPF8Q6P2Q9 CD151-217ENST00000530320 648 ntTSL 312.02□□□□□ -0.498e-8■□□□□ 9.7
PRPF8Q6P2Q9 FABP1-204ENST00000495375 2084 ntTSL 310.79□□□□□ -0.684e-30■□□□□ 9.7
PRPF8Q6P2Q9 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC10.75□□□□□ -0.694e-30■□□□□ 9.7
PRPF8Q6P2Q9 FABP1-201ENST00000295834 555 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.34e-30■□□□□ 9.7
PRPF8Q6P2Q9 FABP1-203ENST00000472846 546 ntTSL 26.88□□□□□ -1.314e-30■□□□□ 9.7
PRPF8Q6P2Q9 ARID1B-206ENST00000452544 4443 ntTSL 26.61□□□□□ -1.352e-7■□□□□ 9.7
PRPF8Q6P2Q9 ACSM3-203ENST00000501740 839 ntTSL 512.5□□□□□ -0.412e-11■□□□□ 9.7
PRPF8Q6P2Q9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.59□□□□□ -0.392e-16■□□□□ 9.7
PRPF8Q6P2Q9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.52e-16■□□□□ 9.7
PRPF8Q6P2Q9 FKBP11-211ENST00000551807 508 ntTSL 322.49■■□□□ 1.192e-8■□□□□ 9.7
PRPF8Q6P2Q9 CCNF-205ENST00000569093 857 ntTSL 221.58■■□□□ 1.045e-6■□□□□ 9.7
PRPF8Q6P2Q9 DHX30-213ENST00000476446 752 ntTSL 219.62■□□□□ 0.739e-9■□□□□ 9.7
PRPF8Q6P2Q9 VAPA-205ENST00000578314 532 ntTSL 319.53■□□□□ 0.725e-6■□□□□ 9.7
PRPF8Q6P2Q9 SUPT5H-210ENST00000598117 859 ntTSL 215.63■□□□□ 0.095e-6■□□□□ 9.7
PRPF8Q6P2Q9 RNF138-208ENST00000583733 587 ntTSL 214.48□□□□□ -0.095e-6■□□□□ 9.7
PRPF8Q6P2Q9 DHX30-203ENST00000415400 613 ntTSL 514.33□□□□□ -0.119e-9■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-206ENST00000452228 576 ntTSL 314.12□□□□□ -0.155e-6■□□□□ 9.7
PRPF8Q6P2Q9 GRK6-208ENST00000511244 555 ntTSL 413.75□□□□□ -0.215e-6■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.235e-6■□□□□ 9.7
PRPF8Q6P2Q9 WASH4P-201ENST00000564273 1246 ntBASIC13.52□□□□□ -0.255e-6■□□□□ 9.7
PRPF8Q6P2Q9 DHX30-214ENST00000492893 601 ntTSL 213.14□□□□□ -0.319e-9■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-204ENST00000432930 2150 ntTSL 1 (best)12.98□□□□□ -0.335e-6■□□□□ 9.7
PRPF8Q6P2Q9 TMEM209-204ENST00000471077 585 ntTSL 412.93□□□□□ -0.345e-6■□□□□ 9.7
PRPF8Q6P2Q9 RNF138-206ENST00000580499 503 ntTSL 212.74□□□□□ -0.375e-6■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-203ENST00000422210 2009 ntTSL 1 (best)12.73□□□□□ -0.375e-6■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-205ENST00000442475 2513 ntTSL 1 (best)12.08□□□□□ -0.485e-6■□□□□ 9.7
PRPF8Q6P2Q9 ALDOC-205ENST00000460201 922 ntTSL 211.95□□□□□ -0.56e-8■□□□□ 9.7
PRPF8Q6P2Q9 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC11.91□□□□□ -0.55e-6■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-207ENST00000469722 1186 ntTSL 1 (best)11.19□□□□□ -0.625e-6■□□□□ 9.7
PRPF8Q6P2Q9 ABCB8-219ENST00000491920 717 ntTSL 210.09□□□□□ -0.795e-6■□□□□ 9.7
PRPF8Q6P2Q9 GDI1-207ENST00000468483 2417 ntTSL 1 (best)9.71□□□□□ -0.855e-6■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-209ENST00000591411 242 ntTSL 59.45□□□□□ -0.95e-6■□□□□ 9.7
PRPF8Q6P2Q9 SERHL-203ENST00000455578 1712 ntTSL 29.39□□□□□ -0.915e-6■□□□□ 9.7
PRPF8Q6P2Q9 TRMT10C-202ENST00000495642 1017 ntTSL 39.27□□□□□ -0.939e-9■□□□□ 9.7
PRPF8Q6P2Q9 P2RX6-202ENST00000413302 3687 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.015e-6■□□□□ 9.7
PRPF8Q6P2Q9 TRANK1-201ENST00000429976 10481 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.15e-6■□□□□ 9.7
PRPF8Q6P2Q9 RTCA-AS1-201ENST00000421185 423 ntTSL 3 BASIC8.08□□□□□ -1.125e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC7.97□□□□□ -1.135e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC7.85□□□□□ -1.155e-6■□□□□ 9.7
PRPF8Q6P2Q9 STRIP1-207ENST00000535003 810 ntTSL 37.71□□□□□ -1.185e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-205ENST00000380692 1071 ntTSL 37.47□□□□□ -1.215e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-203ENST00000361672 2256 ntTSL 2 BASIC7.21□□□□□ -1.265e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.275e-6■□□□□ 9.7
PRPF8Q6P2Q9 STRIP1-208ENST00000539541 694 ntTSL 27□□□□□ -1.295e-6■□□□□ 9.7
PRPF8Q6P2Q9 PNKP-229ENST00000637897 190 ntTSL 56.79□□□□□ -1.325e-6■□□□□ 9.7
PRPF8Q6P2Q9 TTN-AS1-269ENST00000629117 710 ntTSL 56.5□□□□□ -1.375e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-210ENST00000468149 1646 ntTSL 25.99□□□□□ -1.455e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC5.71□□□□□ -1.55e-6■□□□□ 9.7
PRPF8Q6P2Q9 MIR937-201ENST00000401271 86 ntBASIC5.68□□□□□ -1.53e-13■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-204ENST00000380691 589 ntTSL 35.37□□□□□ -1.555e-6■□□□□ 9.7
PRPF8Q6P2Q9 TMEM209-205ENST00000471985 571 ntTSL 45.02□□□□□ -1.615e-6■□□□□ 9.7
PRPF8Q6P2Q9 TTN-AS1-254ENST00000610290 647 ntTSL 54.27□□□□□ -1.735e-6■□□□□ 9.7
PRPF8Q6P2Q9 TTN-AS1-261ENST00000626517 418 ntTSL 53.48□□□□□ -1.855e-6■□□□□ 9.7
PRPF8Q6P2Q9 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.37□□□□□ -1.875e-6■□□□□ 9.7
PRPF8Q6P2Q9 MSL3-217ENST00000494268 1124 ntTSL 22.85□□□□□ -1.955e-6■□□□□ 9.7
PRPF8Q6P2Q9 TFDP2-210ENST00000478006 746 ntTSL 32.49□□□□□ -2.012e-6■□□□□ 9.7
PRPF8Q6P2Q9 TFDP2-223ENST00000497579 878 ntTSL 31.31□□□□□ -2.22e-6■□□□□ 9.7
PRPF8Q6P2Q9 CD151-214ENST00000528867 545 ntTSL 415.65■□□□□ 0.12e-7■□□□□ 9.7
PRPF8Q6P2Q9 CTSA-210ENST00000606000 644 ntTSL 310.36□□□□□ -0.754e-7■□□□□ 9.7
PRPF8Q6P2Q9 SLC9A8-204ENST00000490250 4942 ntTSL 210.78□□□□□ -0.681e-7■□□□□ 9.7
PRPF8Q6P2Q9 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC5.85□□□□□ -1.473e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-206ENST00000571409 741 ntTSL 525.87■■□□□ 1.739e-8■□□□□ 9.7
PRPF8Q6P2Q9 TADA3-205ENST00000492103 1868 ntTSL 210.3□□□□□ -0.769e-8■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-202ENST00000570380 506 ntTSL 59.59□□□□□ -0.879e-8■□□□□ 9.7
PRPF8Q6P2Q9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.265e-7■□□□□ 9.7
PRPF8Q6P2Q9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.395e-7■□□□□ 9.7
PRPF8Q6P2Q9 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC9.66□□□□□ -0.865e-7■□□□□ 9.7
PRPF8Q6P2Q9 CTDNEP1-205ENST00000570828 986 ntTSL 310.56□□□□□ -0.723e-8■□□□□ 9.7
PRPF8Q6P2Q9 TFDP2-204ENST00000467667 865 ntTSL 34.64□□□□□ -1.672e-6■□□□□ 9.7
PRPF8Q6P2Q9 SLC43A3-220ENST00000532278 506 ntTSL 420.22■□□□□ 0.834e-8■□□□□ 9.7
PRPF8Q6P2Q9 SLC43A3-219ENST00000530316 573 ntTSL 416.02■□□□□ 0.164e-8■□□□□ 9.7
PRPF8Q6P2Q9 SLC43A3-222ENST00000533051 571 ntTSL 212.69□□□□□ -0.384e-8■□□□□ 9.7
PRPF8Q6P2Q9 SLC43A3-221ENST00000532795 587 ntTSL 412.49□□□□□ -0.414e-8■□□□□ 9.7
PRPF8Q6P2Q9 SLC43A3-204ENST00000524863 539 ntTSL 311.75□□□□□ -0.534e-8■□□□□ 9.7
PRPF8Q6P2Q9 SLC43A3-208ENST00000526621 562 ntTSL 411.75□□□□□ -0.534e-8■□□□□ 9.7
PRPF8Q6P2Q9 SLC43A3-215ENST00000529748 397 ntTSL 39.19□□□□□ -0.944e-8■□□□□ 9.7
PRPF8Q6P2Q9 PLEKHB1-220ENST00000545106 813 ntTSL 217.21■□□□□ 0.352e-9■□□□□ 9.7
PRPF8Q6P2Q9 PLEKHB1-205ENST00000426191 2022 ntTSL 214.56□□□□□ -0.082e-9■□□□□ 9.7
PRPF8Q6P2Q9 PLEKHB1-211ENST00000540157 568 ntTSL 46.62□□□□□ -1.352e-9■□□□□ 9.7
PRPF8Q6P2Q9 CHD6-206ENST00000470470 1349 ntTSL 54.78□□□□□ -1.641e-6■□□□□ 9.7
PRPF8Q6P2Q9 TEX35-206ENST00000419909 1832 ntTSL 212.05□□□□□ -0.482e-6■□□□□ 9.7
PRPF8Q6P2Q9 C1orf220-201ENST00000367638 576 ntTSL 210□□□□□ -0.812e-6■□□□□ 9.7
PRPF8Q6P2Q9 C1orf220-202ENST00000521244 2577 ntTSL 2 BASIC7.48□□□□□ -1.212e-6■□□□□ 9.7
Retrieved 100 of 73,762 protein–RNA pairs in 538.4 ms