RNA–Protein interactions for RNA: ENST00000539541.1

STRIP1-208, Transcript of striatin interacting protein 1, humanhuman

TSL 2

Gene STRIP1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRIP1-208ENST00000539541 NISCHQ9Y2I1 1504 aa19.84■□□□□ 0.77
STRIP1-208ENST00000539541 ABCC9O60706 1549 aa17.53■□□□□ 0.4
STRIP1-208ENST00000539541 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
STRIP1-208ENST00000539541 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
STRIP1-208ENST00000539541 ZCCHC6Q5VYS8 1495 aaKnown RBP16.74■□□□□ 0.27
STRIP1-208ENST00000539541 HRCP23327 699 aa16.58■□□□□ 0.24
STRIP1-208ENST00000539541 DCAF1Q9Y4B6 1507 aa16.5■□□□□ 0.23
STRIP1-208ENST00000539541 RB1CC1Q8TDY2 1594 aa16.43■□□□□ 0.22
STRIP1-208ENST00000539541 SHROOM4Q9ULL8 1493 aa16.29■□□□□ 0.2
STRIP1-208ENST00000539541 DNAJC5Q9H3Z4 198 aa16.28■□□□□ 0.2
STRIP1-208ENST00000539541 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
STRIP1-208ENST00000539541 SUPT5HO00267 1087 aaKnown RBP16.2■□□□□ 0.18
STRIP1-208ENST00000539541 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
STRIP1-208ENST00000539541 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
STRIP1-208ENST00000539541 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
STRIP1-208ENST00000539541 NACADO15069 1562 aa16.13■□□□□ 0.17
STRIP1-208ENST00000539541 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
STRIP1-208ENST00000539541 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
STRIP1-208ENST00000539541 PCGF6Q9BYE7 350 aa16.05■□□□□ 0.16
STRIP1-208ENST00000539541 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
STRIP1-208ENST00000539541 BICRAQ9NZM4 1560 aa15.94■□□□□ 0.14
STRIP1-208ENST00000539541 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
STRIP1-208ENST00000539541 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
STRIP1-208ENST00000539541 SCRIBQ14160 1630 aa15.84■□□□□ 0.13
STRIP1-208ENST00000539541 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
STRIP1-208ENST00000539541 ZEB1P37275 1124 aaPredicted RBP15.74■□□□□ 0.11
STRIP1-208ENST00000539541 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
STRIP1-208ENST00000539541 LOC105371045A0A1W2PR82 267 aa15.57■□□□□ 0.08
STRIP1-208ENST00000539541 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
STRIP1-208ENST00000539541 CUX2O14529 1486 aa15.49■□□□□ 0.07
STRIP1-208ENST00000539541 MYT1Q01538 1121 aa15.48■□□□□ 0.07
STRIP1-208ENST00000539541 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
STRIP1-208ENST00000539541 BAZ1AQ9NRL2 1556 aaPredicted RBP15.38■□□□□ 0.05
STRIP1-208ENST00000539541 ACIN1Q9UKV3 1341 aaKnown RBP15.27■□□□□ 0.04
STRIP1-208ENST00000539541 MROH2BQ7Z745 1585 aa15.27■□□□□ 0.03
STRIP1-208ENST00000539541 TRIM41Q8WV44 630 aa15.24■□□□□ 0.03
STRIP1-208ENST00000539541 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
STRIP1-208ENST00000539541 SMARCA4P51532 1647 aa15.24■□□□□ 0.03
STRIP1-208ENST00000539541 WIZO95785 1651 aa15.18■□□□□ 0.02
STRIP1-208ENST00000539541 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
STRIP1-208ENST00000539541 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
STRIP1-208ENST00000539541 CENPBP07199 599 aaPredicted RBP15.09■□□□□ 0.01
STRIP1-208ENST00000539541 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
STRIP1-208ENST00000539541 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
STRIP1-208ENST00000539541 SMARCA2P51531 1590 aa14.99□□□□□ -0.01
STRIP1-208ENST00000539541 DIEXFQ68CQ4 756 aaKnown RBP14.96□□□□□ -0.01
STRIP1-208ENST00000539541 CCER1Q8TC90 406 aaPredicted RBP14.93□□□□□ -0.02
STRIP1-208ENST00000539541 FAM9AQ8IZU1 332 aaPredicted RBP14.92□□□□□ -0.02
STRIP1-208ENST00000539541 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
STRIP1-208ENST00000539541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
STRIP1-208ENST00000539541 WRNQ14191 1432 aaPredicted RBP eCLIP14.89□□□□□ -0.03
STRIP1-208ENST00000539541 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
STRIP1-208ENST00000539541 BAZ1BQ9UIG0 1483 aaKnown RBP14.88□□□□□ -0.03
STRIP1-208ENST00000539541 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
STRIP1-208ENST00000539541 NCAPD3P42695 1498 aa14.86□□□□□ -0.03
STRIP1-208ENST00000539541 NESP48681 1621 aa14.84□□□□□ -0.03
STRIP1-208ENST00000539541 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
STRIP1-208ENST00000539541 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
STRIP1-208ENST00000539541 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.06
STRIP1-208ENST00000539541 LAMC3Q9Y6N6 1575 aa14.69□□□□□ -0.06
STRIP1-208ENST00000539541 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
STRIP1-208ENST00000539541 CEP162Q5TB80 1403 aa14.65□□□□□ -0.06
STRIP1-208ENST00000539541 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
STRIP1-208ENST00000539541 CLSPNQ9HAW4 1339 aa14.64□□□□□ -0.07
STRIP1-208ENST00000539541 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
STRIP1-208ENST00000539541 PDS5BQ9NTI5 1447 aa14.61□□□□□ -0.07
STRIP1-208ENST00000539541 EEA1Q15075 1411 aa14.6□□□□□ -0.07
STRIP1-208ENST00000539541 OSCARQ8IYS5 282 aa14.6□□□□□ -0.07
STRIP1-208ENST00000539541 MIER1Q8N108 512 aa14.58□□□□□ -0.08
STRIP1-208ENST00000539541 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
STRIP1-208ENST00000539541 PRDM2Q13029 1718 aa14.55□□□□□ -0.08
STRIP1-208ENST00000539541 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
STRIP1-208ENST00000539541 RIMBP3CA6NJZ7 1639 aa14.54□□□□□ -0.08
STRIP1-208ENST00000539541 RIMBP3BA6NNM3 1639 aa14.54□□□□□ -0.08
STRIP1-208ENST00000539541 RIMBP3Q9UFD9 1639 aa14.54□□□□□ -0.08
STRIP1-208ENST00000539541 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
STRIP1-208ENST00000539541 WDR62O43379 1518 aa14.52□□□□□ -0.08
STRIP1-208ENST00000539541 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
STRIP1-208ENST00000539541 CFTRP13569 1480 aa14.47□□□□□ -0.09
STRIP1-208ENST00000539541 GOLGA3Q08378 1498 aa14.46□□□□□ -0.09
STRIP1-208ENST00000539541 BIVM-ERCC5R4GMW8 1640 aa14.46□□□□□ -0.09
STRIP1-208ENST00000539541 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
STRIP1-208ENST00000539541 TOP2BQ02880 1626 aa14.45□□□□□ -0.1
STRIP1-208ENST00000539541 SOGA1O94964 1423 aa14.42□□□□□ -0.1
STRIP1-208ENST00000539541 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
STRIP1-208ENST00000539541 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
STRIP1-208ENST00000539541 KIF21BO75037 1637 aa14.4□□□□□ -0.1
STRIP1-208ENST00000539541 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
STRIP1-208ENST00000539541 SUPT16HQ9Y5B9 1047 aaKnown RBP14.39□□□□□ -0.11
STRIP1-208ENST00000539541 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
STRIP1-208ENST00000539541 ANP32EQ9BTT0 268 aa14.37□□□□□ -0.11
STRIP1-208ENST00000539541 RUSC2Q8N2Y8 1516 aa14.34□□□□□ -0.11
STRIP1-208ENST00000539541 CEP164Q9UPV0 1460 aa14.33□□□□□ -0.12
STRIP1-208ENST00000539541 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
STRIP1-208ENST00000539541 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
STRIP1-208ENST00000539541 CUX1P39880 1505 aa14.3□□□□□ -0.12
STRIP1-208ENST00000539541 UBTFP17480 764 aaKnown RBP14.29□□□□□ -0.12
STRIP1-208ENST00000539541 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
STRIP1-208ENST00000539541 HNRNPUL2Q1KMD3 747 aaKnown RBP14.28□□□□□ -0.12
STRIP1-208ENST00000539541 CLIP1P30622 1438 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms