RNA–Protein interactions for RNA: ENST00000491920.1

ABCB8-219, Transcript of ATP binding cassette subfamily B member 8, humanhuman

TSL 2

Gene ABCB8, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB8-219ENST00000491920 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
ABCB8-219ENST00000491920 ABCC9O60706 1549 aa26.29■■□□□ 1.8
ABCB8-219ENST00000491920 CCDC180Q9P1Z9 1646 aa26.15■■□□□ 1.78
ABCB8-219ENST00000491920 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
ABCB8-219ENST00000491920 NACADO15069 1562 aa24.78■■□□□ 1.56
ABCB8-219ENST00000491920 DCAF8L2P0C7V8 631 aa24.75■■□□□ 1.55
ABCB8-219ENST00000491920 DNAJC5BQ9UF47 199 aa24.71■■□□□ 1.55
ABCB8-219ENST00000491920 PABPN1Q86U42 306 aaKnown RBP eCLIP24.5■■□□□ 1.51
ABCB8-219ENST00000491920 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
ABCB8-219ENST00000491920 UNC13AQ9UPW8 1703 aa24.3■■□□□ 1.48
ABCB8-219ENST00000491920 BICRAQ9NZM4 1560 aa24.22■■□□□ 1.47
ABCB8-219ENST00000491920 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
ABCB8-219ENST00000491920 DCAF1Q9Y4B6 1507 aa24.09■■□□□ 1.45
ABCB8-219ENST00000491920 SHROOM4Q9ULL8 1493 aa23.89■■□□□ 1.42
ABCB8-219ENST00000491920 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
ABCB8-219ENST00000491920 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.38
ABCB8-219ENST00000491920 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
ABCB8-219ENST00000491920 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
ABCB8-219ENST00000491920 NCAPD3P42695 1498 aa22.91■■□□□ 1.26
ABCB8-219ENST00000491920 ATAD2BQ9ULI0 1458 aa22.83■■□□□ 1.25
ABCB8-219ENST00000491920 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
ABCB8-219ENST00000491920 SMARCA2P51531 1590 aa22.74■■□□□ 1.23
ABCB8-219ENST00000491920 DNAJC5Q9H3Z4 198 aa22.72■■□□□ 1.23
ABCB8-219ENST00000491920 ERCC6Q03468 1493 aa22.7■■□□□ 1.22
ABCB8-219ENST00000491920 HMGXB3Q12766 1538 aa22.7■■□□□ 1.22
ABCB8-219ENST00000491920 BAZ1AQ9NRL2 1556 aaPredicted RBP22.66■■□□□ 1.22
ABCB8-219ENST00000491920 CUX2O14529 1486 aa22.64■■□□□ 1.21
ABCB8-219ENST00000491920 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
ABCB8-219ENST00000491920 NESP48681 1621 aa22.56■■□□□ 1.2
ABCB8-219ENST00000491920 PEG3Q9GZU2 1588 aa22.53■■□□□ 1.2
ABCB8-219ENST00000491920 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
ABCB8-219ENST00000491920 LAMC3Q9Y6N6 1575 aa22.36■■□□□ 1.17
ABCB8-219ENST00000491920 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
ABCB8-219ENST00000491920 PDS5BQ9NTI5 1447 aa22.28■■□□□ 1.16
ABCB8-219ENST00000491920 CADPSQ9ULU8 1353 aa22.23■■□□□ 1.15
ABCB8-219ENST00000491920 WIZO95785 1651 aa22.2■■□□□ 1.14
ABCB8-219ENST00000491920 KIF21AQ7Z4S6 1674 aa22.19■■□□□ 1.14
ABCB8-219ENST00000491920 MRC2Q9UBG0 1479 aa22.08■■□□□ 1.12
ABCB8-219ENST00000491920 RSF1Q96T23 1441 aaPredicted RBP22.05■■□□□ 1.12
ABCB8-219ENST00000491920 WDR62O43379 1518 aa22■■□□□ 1.11
ABCB8-219ENST00000491920 CEP164Q9UPV0 1460 aa21.98■■□□□ 1.11
ABCB8-219ENST00000491920 FANCD2Q9BXW9 1451 aa21.96■■□□□ 1.11
ABCB8-219ENST00000491920 CFTRP13569 1480 aa21.95■■□□□ 1.1
ABCB8-219ENST00000491920 TOP2AP11388 1531 aaKnown RBP21.94■■□□□ 1.1
ABCB8-219ENST00000491920 URB2Q14146 1524 aaKnown RBP21.77■■□□□ 1.08
ABCB8-219ENST00000491920 TRIM41Q8WV44 630 aa21.73■■□□□ 1.07
ABCB8-219ENST00000491920 CCDC88BA6NC98 1476 aa21.71■■□□□ 1.07
ABCB8-219ENST00000491920 OSCARQ8IYS5 282 aa21.65■■□□□ 1.06
ABCB8-219ENST00000491920 PRDM2Q13029 1718 aa21.59■■□□□ 1.05
ABCB8-219ENST00000491920 IFT140Q96RY7 1462 aa21.55■■□□□ 1.04
ABCB8-219ENST00000491920 TOPBP1Q92547 1522 aa21.53■■□□□ 1.04
ABCB8-219ENST00000491920 ZNF608Q9ULD9 1512 aaPredicted RBP21.52■■□□□ 1.04
ABCB8-219ENST00000491920 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
ABCB8-219ENST00000491920 DNMBPQ6XZF7 1577 aa21.43■■□□□ 1.02
ABCB8-219ENST00000491920 EIF4G3O43432 1585 aaKnown RBP21.36■■□□□ 1.01
ABCB8-219ENST00000491920 AQRO60306 1485 aaKnown RBP eCLIP21.33■■□□□ 1.016e-7■■■■■ 29.7
ABCB8-219ENST00000491920 POLA1P09884 1462 aaPredicted RBP21.32■■□□□ 1
ABCB8-219ENST00000491920 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
ABCB8-219ENST00000491920 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
ABCB8-219ENST00000491920 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
ABCB8-219ENST00000491920 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
ABCB8-219ENST00000491920 ARHGEF11O15085 1522 aa21.26■□□□□ 0.99
ABCB8-219ENST00000491920 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
ABCB8-219ENST00000491920 SOGA1O94964 1423 aa21.24■□□□□ 0.99
ABCB8-219ENST00000491920 FBLN2P98095 1184 aa21.24■□□□□ 0.99
ABCB8-219ENST00000491920 TDRD9Q8NDG6 1382 aaKnown RBP21.22■□□□□ 0.99
ABCB8-219ENST00000491920 FGD5Q6ZNL6 1462 aa21.18■□□□□ 0.98
ABCB8-219ENST00000491920 CYB5RLQ6IPT4 315 aa21.17■□□□□ 0.98
ABCB8-219ENST00000491920 CHD1O14646 1710 aa21.17■□□□□ 0.98
ABCB8-219ENST00000491920 CUX1P39880 1505 aa21.14■□□□□ 0.98
ABCB8-219ENST00000491920 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
ABCB8-219ENST00000491920 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
ABCB8-219ENST00000491920 CHMP7Q8WUX9 453 aaPredicted RBP21.07■□□□□ 0.96
ABCB8-219ENST00000491920 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
ABCB8-219ENST00000491920 ARAP1Q96P48 1450 aa21.06■□□□□ 0.96
ABCB8-219ENST00000491920 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
ABCB8-219ENST00000491920 MAGI1Q96QZ7 1491 aaPredicted RBP21.04■□□□□ 0.96
ABCB8-219ENST00000491920 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
ABCB8-219ENST00000491920 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
ABCB8-219ENST00000491920 SYNJ1O43426 1573 aa20.97■□□□□ 0.95
ABCB8-219ENST00000491920 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
ABCB8-219ENST00000491920 TRHP20396 242 aaPredicted RBP20.95■□□□□ 0.94
ABCB8-219ENST00000491920 ABCA10Q8WWZ4 1543 aa20.93■□□□□ 0.94
ABCB8-219ENST00000491920 PBRM1Q86U86 1689 aa20.87■□□□□ 0.93
ABCB8-219ENST00000491920 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
ABCB8-219ENST00000491920 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
ABCB8-219ENST00000491920 TOP2BQ02880 1626 aa20.77■□□□□ 0.92
ABCB8-219ENST00000491920 GRIN2AQ12879 1464 aa20.76■□□□□ 0.91
ABCB8-219ENST00000491920 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
ABCB8-219ENST00000491920 ADAMTS12P58397 1594 aa20.72■□□□□ 0.91
ABCB8-219ENST00000491920 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
ABCB8-219ENST00000491920 NUP160Q12769 1436 aa20.7■□□□□ 0.9
ABCB8-219ENST00000491920 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
ABCB8-219ENST00000491920 ERCC6L2Q5T890 1561 aa20.66■□□□□ 0.9
ABCB8-219ENST00000491920 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
ABCB8-219ENST00000491920 SHROOM2Q13796 1616 aa20.56■□□□□ 0.88
ABCB8-219ENST00000491920 PRG4Q92954 1404 aaPredicted RBP20.53■□□□□ 0.88
ABCB8-219ENST00000491920 JPH4Q96JJ6 628 aa20.52■□□□□ 0.88
ABCB8-219ENST00000491920 RUSC2Q8N2Y8 1516 aa20.43■□□□□ 0.86
ABCB8-219ENST00000491920 IGF1RP08069 1367 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms