RNA–Protein interactions for RNA: ENST00000583733.1

RNF138-208, Transcript of ring finger protein 138, humanhuman

TSL 2

Gene RNF138, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138-208ENST00000583733 NISCHQ9Y2I1 1504 aa40.83■■■■■ 4.13
RNF138-208ENST00000583733 ABCC9O60706 1549 aa37.18■■■■□ 3.54
RNF138-208ENST00000583733 CCDC180Q9P1Z9 1646 aa36.81■■■■□ 3.48
RNF138-208ENST00000583733 RB1CC1Q8TDY2 1594 aa35.22■■■■□ 3.23
RNF138-208ENST00000583733 DNAJC5BQ9UF47 199 aa35.18■■■■□ 3.22
RNF138-208ENST00000583733 NACADO15069 1562 aa34.88■■■■□ 3.17
RNF138-208ENST00000583733 DCAF8L2P0C7V8 631 aa34.69■■■■□ 3.14
RNF138-208ENST00000583733 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
RNF138-208ENST00000583733 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
RNF138-208ENST00000583733 MYO15BQ96JP2 1530 aa34.25■■■■□ 3.07
RNF138-208ENST00000583733 BICRAQ9NZM4 1560 aa34.19■■■■□ 3.06
RNF138-208ENST00000583733 ZCCHC6Q5VYS8 1495 aaKnown RBP33.76■■■□□ 2.99
RNF138-208ENST00000583733 DCAF1Q9Y4B6 1507 aa33.69■■■□□ 2.98
RNF138-208ENST00000583733 SHROOM4Q9ULL8 1493 aa33.67■■■□□ 2.98
RNF138-208ENST00000583733 CC2D2AQ9P2K1 1620 aa33.57■■■□□ 2.96
RNF138-208ENST00000583733 SCRIBQ14160 1630 aa33.54■■■□□ 2.96
RNF138-208ENST00000583733 CECR2Q9BXF3 1484 aa33.52■■■□□ 2.96
RNF138-208ENST00000583733 EIF4G1Q04637 1599 aaKnown RBP33.39■■■□□ 2.94
RNF138-208ENST00000583733 DNAJC5Q9H3Z4 198 aa32.57■■■□□ 2.8
RNF138-208ENST00000583733 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
RNF138-208ENST00000583733 CUX2O14529 1486 aa32.16■■■□□ 2.74
RNF138-208ENST00000583733 ERCC6Q03468 1493 aa32.14■■■□□ 2.74
RNF138-208ENST00000583733 ATAD2BQ9ULI0 1458 aa32.05■■■□□ 2.72
RNF138-208ENST00000583733 SMARCA2P51531 1590 aa31.95■■■□□ 2.71
RNF138-208ENST00000583733 SMARCA4P51532 1647 aa31.94■■■□□ 2.7
RNF138-208ENST00000583733 HMGXB3Q12766 1538 aa31.92■■■□□ 2.7
RNF138-208ENST00000583733 NESP48681 1621 aa31.83■■■□□ 2.69
RNF138-208ENST00000583733 BAZ1BQ9UIG0 1483 aaKnown RBP31.74■■■□□ 2.67
RNF138-208ENST00000583733 BAZ1AQ9NRL2 1556 aaPredicted RBP31.73■■■□□ 2.67
RNF138-208ENST00000583733 PEG3Q9GZU2 1588 aa31.61■■■□□ 2.65
RNF138-208ENST00000583733 THOC2Q8NI27 1593 aaKnown RBP31.57■■■□□ 2.64
RNF138-208ENST00000583733 LAMC3Q9Y6N6 1575 aa31.54■■■□□ 2.64
RNF138-208ENST00000583733 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
RNF138-208ENST00000583733 KIF21AQ7Z4S6 1674 aa31.44■■■□□ 2.62
RNF138-208ENST00000583733 PDS5BQ9NTI5 1447 aa31.37■■■□□ 2.61
RNF138-208ENST00000583733 CADPSQ9ULU8 1353 aa31.2■■■□□ 2.59
RNF138-208ENST00000583733 MRC2Q9UBG0 1479 aa31.12■■■□□ 2.57
RNF138-208ENST00000583733 WIZO95785 1651 aa31.09■■■□□ 2.57
RNF138-208ENST00000583733 WDR62O43379 1518 aa31.05■■■□□ 2.56
RNF138-208ENST00000583733 TRIM41Q8WV44 630 aa31.04■■■□□ 2.56
RNF138-208ENST00000583733 CEP164Q9UPV0 1460 aa30.94■■■□□ 2.54
RNF138-208ENST00000583733 FANCD2Q9BXW9 1451 aa30.87■■■□□ 2.53
RNF138-208ENST00000583733 CFTRP13569 1480 aa30.77■■■□□ 2.52
RNF138-208ENST00000583733 RSF1Q96T23 1441 aaPredicted RBP30.67■■■□□ 2.5
RNF138-208ENST00000583733 OSCARQ8IYS5 282 aa30.66■■■□□ 2.5
RNF138-208ENST00000583733 TOP2AP11388 1531 aaKnown RBP30.65■■■□□ 2.5
RNF138-208ENST00000583733 URB2Q14146 1524 aaKnown RBP30.63■■■□□ 2.49
RNF138-208ENST00000583733 PRDM2Q13029 1718 aa30.49■■■□□ 2.47
RNF138-208ENST00000583733 ZNF608Q9ULD9 1512 aaPredicted RBP30.32■■■□□ 2.44
RNF138-208ENST00000583733 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
RNF138-208ENST00000583733 CCDC88BA6NC98 1476 aa30.31■■■□□ 2.44
RNF138-208ENST00000583733 RIMBP3CA6NJZ7 1639 aa30.3■■■□□ 2.44
RNF138-208ENST00000583733 RIMBP3BA6NNM3 1639 aa30.3■■■□□ 2.44
RNF138-208ENST00000583733 RIMBP3Q9UFD9 1639 aa30.3■■■□□ 2.44
RNF138-208ENST00000583733 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
RNF138-208ENST00000583733 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
RNF138-208ENST00000583733 ABCC8Q09428 1581 aa30.15■■■□□ 2.42
RNF138-208ENST00000583733 EIF4G3O43432 1585 aaKnown RBP30.14■■■□□ 2.42
RNF138-208ENST00000583733 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
RNF138-208ENST00000583733 CHD1O14646 1710 aa30.02■■■□□ 2.4
RNF138-208ENST00000583733 AQRO60306 1485 aaKnown RBP eCLIP30■■■□□ 2.39
RNF138-208ENST00000583733 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
RNF138-208ENST00000583733 CYB5RLQ6IPT4 315 aa29.99■■■□□ 2.39
RNF138-208ENST00000583733 FBLN2P98095 1184 aa29.91■■■□□ 2.38
RNF138-208ENST00000583733 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
RNF138-208ENST00000583733 ARAP1Q96P48 1450 aa29.83■■■□□ 2.37
RNF138-208ENST00000583733 RAD54L2Q9Y4B4 1467 aa29.81■■■□□ 2.36
RNF138-208ENST00000583733 TRHP20396 242 aaPredicted RBP29.79■■■□□ 2.36
RNF138-208ENST00000583733 SOGA1O94964 1423 aa29.77■■■□□ 2.36
RNF138-208ENST00000583733 TDRD9Q8NDG6 1382 aaKnown RBP29.77■■■□□ 2.36
RNF138-208ENST00000583733 SNAPC4Q5SXM2 1469 aa29.68■■■□□ 2.34
RNF138-208ENST00000583733 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
RNF138-208ENST00000583733 WDR97A6NE52 1622 aa29.65■■■□□ 2.34
RNF138-208ENST00000583733 CLASP1Q7Z460 1538 aa29.61■■■□□ 2.33
RNF138-208ENST00000583733 CHMP7Q8WUX9 453 aaPredicted RBP29.61■■■□□ 2.33
RNF138-208ENST00000583733 CUX1P39880 1505 aa29.59■■■□□ 2.33
RNF138-208ENST00000583733 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
RNF138-208ENST00000583733 MAGI1Q96QZ7 1491 aaPredicted RBP29.58■■■□□ 2.33
RNF138-208ENST00000583733 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
RNF138-208ENST00000583733 SYNJ2O15056 1496 aa29.49■■■□□ 2.31
RNF138-208ENST00000583733 PBRM1Q86U86 1689 aa29.44■■■□□ 2.3
RNF138-208ENST00000583733 GAPVD1Q14C86 1478 aa29.4■■■□□ 2.3
RNF138-208ENST00000583733 ABCA5Q8WWZ7 1642 aa29.3■■■□□ 2.28
RNF138-208ENST00000583733 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
RNF138-208ENST00000583733 AEBP2Q6ZN18 517 aaPredicted RBP29.19■■■□□ 2.26
RNF138-208ENST00000583733 GRIN2AQ12879 1464 aa29.17■■■□□ 2.26
RNF138-208ENST00000583733 ERCC6L2Q5T890 1561 aa29.14■■■□□ 2.26
RNF138-208ENST00000583733 WRNQ14191 1432 aaPredicted RBP eCLIP29.13■■■□□ 2.25
RNF138-208ENST00000583733 ADAMTS12P58397 1594 aa29.11■■■□□ 2.25
RNF138-208ENST00000583733 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
RNF138-208ENST00000583733 CEP170Q5SW79 1584 aa29.09■■■□□ 2.25
RNF138-208ENST00000583733 NUP160Q12769 1436 aa29.07■■■□□ 2.24
RNF138-208ENST00000583733 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
RNF138-208ENST00000583733 TOP2BQ02880 1626 aa29.02■■■□□ 2.24
RNF138-208ENST00000583733 SHROOM2Q13796 1616 aa29■■■□□ 2.23
RNF138-208ENST00000583733 FHAD1B1AJZ9 1412 aa29■■■□□ 2.23
RNF138-208ENST00000583733 ERICH3Q5RHP9 1530 aa28.93■■■□□ 2.22
RNF138-208ENST00000583733 KIF13AQ9H1H9 1805 aa28.85■■■□□ 2.21
RNF138-208ENST00000583733 PRG4Q92954 1404 aaPredicted RBP28.85■■■□□ 2.21
RNF138-208ENST00000583733 JPH4Q96JJ6 628 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms