Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
HPS1Q92902 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.07■□□□□ 0.48
HPS1Q92902 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.07■□□□□ 0.48
HPS1Q92902 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.07■□□□□ 0.48
HPS1Q92902 KRT18P61-201ENST00000585825 1298 ntBASIC18.07■□□□□ 0.48
HPS1Q92902 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.07■□□□□ 0.48
HPS1Q92902 BID-214ENST00000617586 542 ntTSL 5 BASIC18.07■□□□□ 0.48
HPS1Q92902 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.07■□□□□ 0.48
HPS1Q92902 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HPS1Q92902 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HPS1Q92902 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS1Q92902 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS1Q92902 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS1Q92902 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.06■□□□□ 0.48
HPS1Q92902 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HPS1Q92902 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS1Q92902 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.06■□□□□ 0.48
HPS1Q92902 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 AC106820.2-201ENST00000563775 3264 ntBASIC18.06■□□□□ 0.48
HPS1Q92902 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HPS1Q92902 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 AC079140.4-201ENST00000507448 529 ntBASIC18.06■□□□□ 0.48
HPS1Q92902 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.06■□□□□ 0.48
HPS1Q92902 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.06■□□□□ 0.48
HPS1Q92902 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS1Q92902 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HPS1Q92902 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HPS1Q92902 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.06■□□□□ 0.48
HPS1Q92902 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HPS1Q92902 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS1Q92902 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HPS1Q92902 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS1Q92902 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS1Q92902 AL133373.2-201ENST00000623187 2828 ntBASIC18.05■□□□□ 0.48
HPS1Q92902 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS1Q92902 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS1Q92902 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HPS1Q92902 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.05■□□□□ 0.48
HPS1Q92902 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS1Q92902 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.05■□□□□ 0.48
HPS1Q92902 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.05■□□□□ 0.48
HPS1Q92902 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HPS1Q92902 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.05■□□□□ 0.48
HPS1Q92902 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.05■□□□□ 0.48
HPS1Q92902 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HPS1Q92902 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 AP006587.3-201ENST00000525742 1516 ntBASIC18.04■□□□□ 0.48
HPS1Q92902 AC099778.1-201ENST00000568593 1911 ntBASIC18.04■□□□□ 0.48
HPS1Q92902 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS1Q92902 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.04■□□□□ 0.48
HPS1Q92902 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
HPS1Q92902 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.04■□□□□ 0.48
HPS1Q92902 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HPS1Q92902 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS1Q92902 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.04■□□□□ 0.48
HPS1Q92902 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.04■□□□□ 0.48
HPS1Q92902 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.04■□□□□ 0.48
HPS1Q92902 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.04■□□□□ 0.48
HPS1Q92902 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.04■□□□□ 0.48
HPS1Q92902 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
HPS1Q92902 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.04■□□□□ 0.48
HPS1Q92902 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HPS1Q92902 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HPS1Q92902 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms