Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.5■□□□□ 0.553e-8■■□□□ 13.9
SRSF1Q07955 SLC22A31-204ENST00000568161 651 ntTSL 313.48□□□□□ -0.253e-8■■□□□ 13.9
SRSF1Q07955 DDX39A-206ENST00000587730 1813 ntTSL 1 (best)14.33□□□□□ -0.122e-6■■□□□ 13.9
SRSF1Q07955 MSH5-212ENST00000467319 688 ntTSL 210.06□□□□□ -0.82e-6■■□□□ 13.9
SRSF1Q07955 MSH5-213ENST00000468136 690 ntTSL 28.13□□□□□ -1.112e-6■■□□□ 13.9
SRSF1Q07955 VEGFA-217ENST00000518538 535 ntTSL 220.1■□□□□ 0.813e-8■■□□□ 13.8
SRSF1Q07955 PIEZO1-209ENST00000490756 446 ntTSL 319.83■□□□□ 0.777e-16■■□□□ 13.8
SRSF1Q07955 HNRNPUL2-202ENST00000540127 439 ntTSL 33.95□□□□□ -1.786e-10■■□□□ 13.8
SRSF1Q07955 AKT1-210ENST00000554826 572 ntTSL 314.62□□□□□ -0.074e-6■■□□□ 13.8
SRSF1Q07955 AKT1-212ENST00000555380 534 ntTSL 411.15□□□□□ -0.624e-6■■□□□ 13.8
SRSF1Q07955 PAXX-204ENST00000481187 794 ntTSL 315.8■□□□□ 0.123e-6■■□□□ 13.8
SRSF1Q07955 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.472e-8■■□□□ 13.8
SRSF1Q07955 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.662e-8■■□□□ 13.8
SRSF1Q07955 EML4-202ENST00000401738 3797 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.092e-8■■□□□ 13.8
SRSF1Q07955 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.581e-7■■□□□ 13.8
SRSF1Q07955 SUPT5H-201ENST00000359191 3770 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.962e-7■■□□□ 13.8
SRSF1Q07955 SUPT5H-204ENST00000432763 3710 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.972e-7■■□□□ 13.8
SRSF1Q07955 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.982e-7■■□□□ 13.8
SRSF1Q07955 SUPT5H-215ENST00000599117 3902 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.062e-7■■□□□ 13.8
SRSF1Q07955 SUPT5H-213ENST00000598725 3742 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.072e-7■■□□□ 13.8
SRSF1Q07955 SUN1-218ENST00000450881 513 ntTSL 412.98□□□□□ -0.332e-6■■□□□ 13.8
SRSF1Q07955 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.155e-7■■□□□ 13.8
SRSF1Q07955 PAWR-211ENST00000552637 364 ntTSL 219.9■□□□□ 0.783e-8■■□□□ 13.8
SRSF1Q07955 PAWR-206ENST00000548426 494 ntTSL 319.08■□□□□ 0.643e-8■■□□□ 13.8
SRSF1Q07955 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.463e-8■■□□□ 13.8
SRSF1Q07955 HNRNPU-225ENST00000640119 461 ntTSL 510.98□□□□□ -0.654e-7■■□□□ 13.8
SRSF1Q07955 HNRNPU-212ENST00000638230 1922 ntTSL 59.65□□□□□ -0.861e-7■■□□□ 13.8
SRSF1Q07955 HNRNPU-221ENST00000639824 1450 ntTSL 58.54□□□□□ -1.044e-7■■□□□ 13.8
SRSF1Q07955 HNRNPU-218ENST00000639064 2625 ntTSL 57.78□□□□□ -1.164e-7■■□□□ 13.8
SRSF1Q07955 HNRNPU-208ENST00000475997 5290 ntTSL 55.15□□□□□ -1.582e-8■■□□□ 13.8
SRSF1Q07955 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.017e-10■■□□□ 13.8
SRSF1Q07955 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.367e-8■■□□□ 13.8
SRSF1Q07955 ARID4B-204ENST00000418304 1759 ntTSL 514.8□□□□□ -0.042e-6■■□□□ 13.8
SRSF1Q07955 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.555e-7■■□□□ 13.8
SRSF1Q07955 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.985e-7■■□□□ 13.8
SRSF1Q07955 RTN4-211ENST00000438462 656 ntTSL 513.23□□□□□ -0.296e-8■■□□□ 13.7
SRSF1Q07955 CALR-203ENST00000586803 667 ntTSL 212.41□□□□□ -0.423e-24■■□□□ 13.7
SRSF1Q07955 CALR-202ENST00000586760 913 ntTSL 211.63□□□□□ -0.553e-24■■□□□ 13.7
SRSF1Q07955 TACC3-210ENST00000485989 726 ntTSL 311.98□□□□□ -0.492e-6■■□□□ 13.7
SRSF1Q07955 TACC3-209ENST00000484651 2715 ntTSL 210.91□□□□□ -0.662e-6■■□□□ 13.7
SRSF1Q07955 TACC3-206ENST00000470136 650 ntTSL 39.45□□□□□ -0.92e-6■■□□□ 13.7
SRSF1Q07955 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.351e-9■■□□□ 13.7
SRSF1Q07955 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.481e-9■■□□□ 13.7
SRSF1Q07955 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC10.44□□□□□ -0.741e-9■■□□□ 13.7
SRSF1Q07955 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.751e-9■■□□□ 13.7
SRSF1Q07955 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.22■□□□□ 0.195e-35■■□□□ 13.7
SRSF1Q07955 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.22■□□□□ 0.195e-35■■□□□ 13.7
SRSF1Q07955 SNHG8-203ENST00000602520 327 ntTSL 28.49□□□□□ -1.055e-35■■□□□ 13.7
SRSF1Q07955 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.75□□□□□ -1.495e-35■■□□□ 13.7
SRSF1Q07955 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.95□□□□□ -0.183e-7■■□□□ 13.7
SRSF1Q07955 FMO5-204ENST00000478432 1606 ntTSL 28.18□□□□□ -1.15e-10■■□□□ 13.7
SRSF1Q07955 FMO5-207ENST00000533848 618 ntTSL 46.02□□□□□ -1.455e-10■■□□□ 13.7
SRSF1Q07955 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.47e-12■■□□□ 13.7
SRSF1Q07955 DHRS2-209ENST00000557535 927 ntTSL 516.55■□□□□ 0.247e-12■■□□□ 13.7
SRSF1Q07955 DHRS2-204ENST00000553600 844 ntTSL 212.65□□□□□ -0.387e-12■■□□□ 13.7
SRSF1Q07955 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.7□□□□□ -0.222e-8■■□□□ 13.7
SRSF1Q07955 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.762e-8■■□□□ 13.7
SRSF1Q07955 SYNCRIP-203ENST00000444272 610 ntTSL 316.21■□□□□ 0.192e-6■■□□□ 13.7
SRSF1Q07955 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.442e-6■■□□□ 13.7
SRSF1Q07955 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.72e-6■■□□□ 13.7
SRSF1Q07955 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.883e-11■■□□□ 13.7
SRSF1Q07955 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.083e-11■■□□□ 13.7
SRSF1Q07955 DDX39A-208ENST00000588692 1478 ntTSL 513.61□□□□□ -0.232e-6■■□□□ 13.7
SRSF1Q07955 DDX39A-217ENST00000592391 1080 ntTSL 513.47□□□□□ -0.252e-6■■□□□ 13.7
SRSF1Q07955 DDX39A-219ENST00000592927 823 ntTSL 311.89□□□□□ -0.512e-6■■□□□ 13.7
SRSF1Q07955 SMC4-206ENST00000465903 849 ntTSL 323.94■■□□□ 1.429e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.059e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-202ENST00000322176 925 ntTSL 320.62■□□□□ 0.899e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-218ENST00000521459 714 ntTSL 520.52■□□□□ 0.889e-8■■□□□ 13.7
SRSF1Q07955 CDK5RAP2-214ENST00000481266 970 ntTSL 520.3■□□□□ 0.849e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-210ENST00000530082 581 ntTSL 319.64■□□□□ 0.739e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-204ENST00000373966 1875 ntTSL 519.36■□□□□ 0.699e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-203ENST00000373963 1657 ntTSL 518.69■□□□□ 0.589e-8■■□□□ 13.7
SRSF1Q07955 SMC4-222ENST00000490207 821 ntTSL 518.59■□□□□ 0.579e-8■■□□□ 13.7
SRSF1Q07955 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.22■□□□□ 0.519e-8■■□□□ 13.7
SRSF1Q07955 SMC4-221ENST00000489573 1553 ntTSL 1 (best)18.19■□□□□ 0.59e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-214ENST00000532382 855 ntTSL 317.24■□□□□ 0.359e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-216ENST00000532777 915 ntTSL 1 (best)16.96■□□□□ 0.319e-8■■□□□ 13.7
SRSF1Q07955 BCL9L-203ENST00000527266 696 ntTSL 316.7■□□□□ 0.269e-8■■□□□ 13.7
SRSF1Q07955 SMC4-216ENST00000485645 583 ntTSL 516.59■□□□□ 0.259e-8■■□□□ 13.7
SRSF1Q07955 SMC4-226ENST00000497311 708 ntTSL 516.59■□□□□ 0.259e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.38■□□□□ 0.219e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-212ENST00000530776 546 ntTSL 416.38■□□□□ 0.219e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-221ENST00000523527 565 ntTSL 216.19■□□□□ 0.189e-8■■□□□ 13.7
SRSF1Q07955 SMC4-209ENST00000468653 1756 ntTSL 215.62■□□□□ 0.099e-8■■□□□ 13.7
SRSF1Q07955 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -09e-8■■□□□ 13.7
SRSF1Q07955 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.029e-8■■□□□ 13.7
SRSF1Q07955 SMC4-211ENST00000469858 1971 ntTSL 214.84□□□□□ -0.039e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.09□□□□□ -0.159e-8■■□□□ 13.7
SRSF1Q07955 TAOK2-205ENST00000566552 2372 ntTSL 214.01□□□□□ -0.175e-6■■□□□ 13.7
SRSF1Q07955 ZNF7-213ENST00000532051 540 ntTSL 413.94□□□□□ -0.189e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-208ENST00000529767 546 ntTSL 413.89□□□□□ -0.199e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-217ENST00000520694 673 ntTSL 313.51□□□□□ -0.259e-8■■□□□ 13.7
SRSF1Q07955 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.39□□□□□ -0.275e-6■■□□□ 13.7
SRSF1Q07955 BRD9-218ENST00000519838 396 ntTSL 213.36□□□□□ -0.272e-11■■□□□ 13.7
SRSF1Q07955 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.23□□□□□ -0.299e-8■■□□□ 13.7
SRSF1Q07955 DNPEP-208ENST00000434339 638 ntTSL 313.09□□□□□ -0.319e-8■■□□□ 13.7
SRSF1Q07955 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.07□□□□□ -0.329e-8■■□□□ 13.7
SRSF1Q07955 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.369e-8■■□□□ 13.7
SRSF1Q07955 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.75□□□□□ -0.379e-8■■□□□ 13.7
Retrieved 100 of 14,836 protein–RNA pairs in 104.4 ms