RNA–Protein interactions for RNA: ENST00000402194.6

SUPT5H-203, Transcript of SPT5 homolog, DSIF elongation factor subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SUPT5H, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT5H-203ENST00000402194 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
SUPT5H-203ENST00000402194 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
SUPT5H-203ENST00000402194 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
SUPT5H-203ENST00000402194 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
SUPT5H-203ENST00000402194 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
SUPT5H-203ENST00000402194 CCDC180Q9P1Z9 1646 aa19.15■□□□□ 0.66
SUPT5H-203ENST00000402194 HRCP23327 699 aa19.12■□□□□ 0.65
SUPT5H-203ENST00000402194 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
SUPT5H-203ENST00000402194 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
SUPT5H-203ENST00000402194 PELP1Q8IZL8 1130 aaKnown RBP18.99■□□□□ 0.63
SUPT5H-203ENST00000402194 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
SUPT5H-203ENST00000402194 MYO15BQ96JP2 1530 aa18.76■□□□□ 0.59
SUPT5H-203ENST00000402194 ABCC9O60706 1549 aa18.74■□□□□ 0.59
SUPT5H-203ENST00000402194 LOC105371045A0A1W2PR82 267 aa18.7■□□□□ 0.58
SUPT5H-203ENST00000402194 EHMT2Q96KQ7 1210 aa18.58■□□□□ 0.56
SUPT5H-203ENST00000402194 FAM9AQ8IZU1 332 aaPredicted RBP18.57■□□□□ 0.56
SUPT5H-203ENST00000402194 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
SUPT5H-203ENST00000402194 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
SUPT5H-203ENST00000402194 TRIM26Q12899 539 aaPredicted RBP18.37■□□□□ 0.53
SUPT5H-203ENST00000402194 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
SUPT5H-203ENST00000402194 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
SUPT5H-203ENST00000402194 MYT1Q01538 1121 aa18.34■□□□□ 0.53
SUPT5H-203ENST00000402194 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
SUPT5H-203ENST00000402194 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.58e-7■■■□□ 17.8
SUPT5H-203ENST00000402194 ZEB1P37275 1124 aaPredicted RBP18.09■□□□□ 0.49
SUPT5H-203ENST00000402194 RB1CC1Q8TDY2 1594 aa17.99■□□□□ 0.47
SUPT5H-203ENST00000402194 TTBK1Q5TCY1 1321 aaPredicted RBP17.98■□□□□ 0.47
SUPT5H-203ENST00000402194 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
SUPT5H-203ENST00000402194 NACADO15069 1562 aa17.9■□□□□ 0.46
SUPT5H-203ENST00000402194 GTF3C3Q9Y5Q9 886 aa17.89■□□□□ 0.45
SUPT5H-203ENST00000402194 CCER1Q8TC90 406 aaPredicted RBP17.85■□□□□ 0.45
SUPT5H-203ENST00000402194 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.45
SUPT5H-203ENST00000402194 ACIN1Q9UKV3 1341 aaKnown RBP17.82■□□□□ 0.44
SUPT5H-203ENST00000402194 NEUROD1Q13562 356 aa17.82■□□□□ 0.44
SUPT5H-203ENST00000402194 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
SUPT5H-203ENST00000402194 CENPBP07199 599 aaPredicted RBP17.77■□□□□ 0.44
SUPT5H-203ENST00000402194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.75■□□□□ 0.43
SUPT5H-203ENST00000402194 WIZO95785 1651 aa17.69■□□□□ 0.42
SUPT5H-203ENST00000402194 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
SUPT5H-203ENST00000402194 BAZ1AQ9NRL2 1556 aaPredicted RBP17.62■□□□□ 0.41
SUPT5H-203ENST00000402194 RANGAP1P46060 587 aaPredicted RBP17.6■□□□□ 0.41
SUPT5H-203ENST00000402194 APLP2Q06481 763 aa17.56■□□□□ 0.4
SUPT5H-203ENST00000402194 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
SUPT5H-203ENST00000402194 ABCC8Q09428 1581 aa17.47■□□□□ 0.39
SUPT5H-203ENST00000402194 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
SUPT5H-203ENST00000402194 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
SUPT5H-203ENST00000402194 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
SUPT5H-203ENST00000402194 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
SUPT5H-203ENST00000402194 SOGA1O94964 1423 aa17.41■□□□□ 0.38
SUPT5H-203ENST00000402194 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
SUPT5H-203ENST00000402194 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
SUPT5H-203ENST00000402194 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
SUPT5H-203ENST00000402194 EEA1Q15075 1411 aa17.31■□□□□ 0.36
SUPT5H-203ENST00000402194 WRNQ14191 1432 aaPredicted RBP eCLIP17.29■□□□□ 0.369e-6■■■■■ 50.1
SUPT5H-203ENST00000402194 BCL11AQ9H165 835 aa17.29■□□□□ 0.36
SUPT5H-203ENST00000402194 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
SUPT5H-203ENST00000402194 GOLGA3Q08378 1498 aa17.25■□□□□ 0.35
SUPT5H-203ENST00000402194 RUSC2Q8N2Y8 1516 aa17.24■□□□□ 0.35
SUPT5H-203ENST00000402194 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
SUPT5H-203ENST00000402194 CLIP1P30622 1438 aa17.16■□□□□ 0.34
SUPT5H-203ENST00000402194 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
SUPT5H-203ENST00000402194 EIF4G1Q04637 1599 aaKnown RBP17.13■□□□□ 0.33
SUPT5H-203ENST00000402194 CEP164Q9UPV0 1460 aa17.13■□□□□ 0.33
SUPT5H-203ENST00000402194 ITGAEP38570 1179 aa17.06■□□□□ 0.32
SUPT5H-203ENST00000402194 BICRAQ9NZM4 1560 aa17.05■□□□□ 0.32
SUPT5H-203ENST00000402194 ATAD2BQ9ULI0 1458 aa17.02■□□□□ 0.32
SUPT5H-203ENST00000402194 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
SUPT5H-203ENST00000402194 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
SUPT5H-203ENST00000402194 ATP1B4Q9UN42 357 aaPredicted RBP16.99■□□□□ 0.31
SUPT5H-203ENST00000402194 VPS8Q8N3P4 1428 aa16.97■□□□□ 0.31
SUPT5H-203ENST00000402194 RAPGEF2Q9Y4G8 1499 aa16.95■□□□□ 0.3
SUPT5H-203ENST00000402194 MIER1Q8N108 512 aa16.95■□□□□ 0.3
SUPT5H-203ENST00000402194 SYNJ1O43426 1573 aa16.93■□□□□ 0.3
SUPT5H-203ENST00000402194 BCANQ96GW7 911 aa16.85■□□□□ 0.29
SUPT5H-203ENST00000402194 KIF21BO75037 1637 aa16.82■□□□□ 0.28
SUPT5H-203ENST00000402194 KIF27Q86VH2 1401 aa16.81■□□□□ 0.28
SUPT5H-203ENST00000402194 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
SUPT5H-203ENST00000402194 KANK4Q5T7N3 995 aaPredicted RBP16.8■□□□□ 0.28
SUPT5H-203ENST00000402194 FAM50AQ14320 339 aaKnown RBP16.77■□□□□ 0.28
SUPT5H-203ENST00000402194 P3H3Q8IVL6 736 aa16.77■□□□□ 0.27
SUPT5H-203ENST00000402194 TSHZ2Q9NRE2 1034 aa16.76■□□□□ 0.27
SUPT5H-203ENST00000402194 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
SUPT5H-203ENST00000402194 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
SUPT5H-203ENST00000402194 ERICH6Q7L0X2 663 aa16.68■□□□□ 0.26
SUPT5H-203ENST00000402194 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
SUPT5H-203ENST00000402194 CLSPNQ9HAW4 1339 aa16.67■□□□□ 0.26
SUPT5H-203ENST00000402194 CCNB3Q8WWL7 1395 aa16.65■□□□□ 0.26
SUPT5H-203ENST00000402194 CUX2O14529 1486 aa16.64■□□□□ 0.25
SUPT5H-203ENST00000402194 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
SUPT5H-203ENST00000402194 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
SUPT5H-203ENST00000402194 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
SUPT5H-203ENST00000402194 DNAJC5BQ9UF47 199 aa16.6■□□□□ 0.25
SUPT5H-203ENST00000402194 ARAP1Q96P48 1450 aa16.6■□□□□ 0.25
SUPT5H-203ENST00000402194 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
SUPT5H-203ENST00000402194 CARMIL1Q5VZK9 1371 aa16.57■□□□□ 0.24
SUPT5H-203ENST00000402194 CUX1P39880 1505 aa16.57■□□□□ 0.24
SUPT5H-203ENST00000402194 CADPSQ9ULU8 1353 aa16.55■□□□□ 0.24
SUPT5H-203ENST00000402194 CFTRP13569 1480 aa16.52■□□□□ 0.24
SUPT5H-203ENST00000402194 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
SUPT5H-203ENST00000402194 IGF1RP08069 1367 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms