Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV4A0A0B4J268 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 HCG11-201ENST00000411553 5696 ntBASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 CD37-204ENST00000535669 1674 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 AC112907.3-201ENST00000577781 2400 ntBASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV4A0A0B4J268 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 AL589743.5-201ENST00000616611 1050 ntBASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 H19-201ENST00000411754 1788 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV4A0A0B4J268 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 AC005181.1-201ENST00000604782 1256 ntBASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV4A0A0B4J268 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms