Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ECHDC2-211ENST00000480312 804 ntTSL 514.16□□□□□ -0.141e-8■□□□□ 10.2
PRPF8Q6P2Q9 ECHDC2-226ENST00000544531 548 ntTSL 413.79□□□□□ -0.21e-8■□□□□ 10.2
PRPF8Q6P2Q9 ECHDC2-216ENST00000488268 631 ntTSL 39.52□□□□□ -0.891e-8■□□□□ 10.2
PRPF8Q6P2Q9 SPIRE2-203ENST00000561883 672 ntTSL 314.98□□□□□ -0.012e-8■□□□□ 10.2
PRPF8Q6P2Q9 NEDD8-207ENST00000533242 2300 ntTSL 1 (best)7.04□□□□□ -1.281e-15■□□□□ 10.2
PRPF8Q6P2Q9 SUN2-213ENST00000464202 541 ntTSL 215.59■□□□□ 0.091e-7■□□□□ 10.2
PRPF8Q6P2Q9 SUN2-216ENST00000477262 914 ntTSL 312.92□□□□□ -0.341e-7■□□□□ 10.2
PRPF8Q6P2Q9 SUN2-214ENST00000469086 1351 ntTSL 512.9□□□□□ -0.351e-7■□□□□ 10.2
PRPF8Q6P2Q9 DPP7-211ENST00000485456 968 ntTSL 520.62■□□□□ 0.893e-8■□□□□ 10.2
PRPF8Q6P2Q9 DPP7-205ENST00000472306 919 ntTSL 519.49■□□□□ 0.713e-8■□□□□ 10.2
PRPF8Q6P2Q9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.373e-8■□□□□ 10.2
PRPF8Q6P2Q9 DPP7-206ENST00000473532 1144 ntTSL 514.53□□□□□ -0.083e-8■□□□□ 10.2
PRPF8Q6P2Q9 GPATCH4-214ENST00000529520 552 ntTSL 27.15□□□□□ -1.271e-6■□□□□ 10.2
PRPF8Q6P2Q9 GPATCH4-209ENST00000498641 534 ntTSL 35.54□□□□□ -1.521e-6■□□□□ 10.2
PRPF8Q6P2Q9 KAT8-205ENST00000539683 1051 ntTSL 214.75□□□□□ -0.052e-6■□□□□ 10.2
PRPF8Q6P2Q9 GTF3C3-211ENST00000481098 547 ntTSL 22.85□□□□□ -1.952e-6■□□□□ 10.2
PRPF8Q6P2Q9 TNNT1-207ENST00000587089 880 ntTSL 513.8□□□□□ -0.21e-6■□□□□ 10.2
PRPF8Q6P2Q9 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.57■□□□□ 0.241e-7■□□□□ 10.2
PRPF8Q6P2Q9 GPER1-205ENST00000413368 1105 ntTSL 214.71□□□□□ -0.054e-7■□□□□ 10.2
PRPF8Q6P2Q9 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.134e-7■□□□□ 10.2
PRPF8Q6P2Q9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.524e-7■□□□□ 10.2
PRPF8Q6P2Q9 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.624e-7■□□□□ 10.2
PRPF8Q6P2Q9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC22.85■■□□□ 1.253e-10■□□□□ 10.2
PRPF8Q6P2Q9 URI1-208ENST00000574233 486 ntTSL 31.69□□□□□ -2.143e-7■□□□□ 10.2
PRPF8Q6P2Q9 TMEM150A-206ENST00000425160 428 ntTSL 28.43□□□□□ -1.062e-15■□□□□ 10.2
PRPF8Q6P2Q9 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.14□□□□□ -0.317e-7■□□□□ 10.2
PRPF8Q6P2Q9 ADCY7-210ENST00000567277 2304 ntTSL 1 (best)11.73□□□□□ -0.537e-7■□□□□ 10.2
PRPF8Q6P2Q9 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC10.71□□□□□ -0.697e-7■□□□□ 10.2
PRPF8Q6P2Q9 HGS-209ENST00000573080 1809 nt18.33■□□□□ 0.521e-10■□□□□ 10.2
PRPF8Q6P2Q9 PLCD1-208ENST00000495367 567 ntTSL 316.16■□□□□ 0.181e-10■□□□□ 10.2
PRPF8Q6P2Q9 COPE-205ENST00000595984 434 ntTSL 310.28□□□□□ -0.761e-6■□□□□ 10.2
PRPF8Q6P2Q9 SBF1-207ENST00000476293 399 ntTSL 311.91□□□□□ -0.51e-6■□□□□ 10.2
PRPF8Q6P2Q9 DNAJA3-212ENST00000576180 2288 ntTSL 29.62□□□□□ -0.873e-9■□□□□ 10.2
PRPF8Q6P2Q9 MHENCR-201ENST00000411579 582 ntTSL 217.41■□□□□ 0.381e-6■□□□□ 10.2
PRPF8Q6P2Q9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.51■□□□□ 0.071e-6■□□□□ 10.2
PRPF8Q6P2Q9 BST2-203ENST00000533098 459 ntTSL 28.28□□□□□ -1.083e-13■□□□□ 10.2
PRPF8Q6P2Q9 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.72■□□□□ 0.115e-8■□□□□ 10.2
PRPF8Q6P2Q9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.09□□□□□ -0.475e-8■□□□□ 10.2
PRPF8Q6P2Q9 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.715e-8■□□□□ 10.2
PRPF8Q6P2Q9 FCGR2C-207ENST00000496692 554 ntTSL 412.8□□□□□ -0.363e-7■□□□□ 10.1
PRPF8Q6P2Q9 FCGR2C-201ENST00000465075 769 ntTSL 1 (best)8.53□□□□□ -1.043e-7■□□□□ 10.1
PRPF8Q6P2Q9 FCGR2C-206ENST00000482226 527 ntTSL 47.92□□□□□ -1.143e-7■□□□□ 10.1
PRPF8Q6P2Q9 FCGR2C-205ENST00000473712 567 ntTSL 56.22□□□□□ -1.413e-7■□□□□ 10.1
PRPF8Q6P2Q9 DDB2-202ENST00000378600 717 ntTSL 1 (best) BASIC9.5□□□□□ -0.892e-8■□□□□ 10.1
PRPF8Q6P2Q9 DDB2-204ENST00000378603 1092 ntTSL 1 (best) BASIC9.5□□□□□ -0.892e-8■□□□□ 10.1
PRPF8Q6P2Q9 DDB2-211ENST00000616278 960 ntTSL 29.5□□□□□ -0.892e-8■□□□□ 10.1
PRPF8Q6P2Q9 PTPRK-202ENST00000368205 662 ntTSL 22.19□□□□□ -2.064e-12■□□□□ 10.1
PRPF8Q6P2Q9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.993e-6■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.07■□□□□ 0.83e-6■□□□□ 10.1
PRPF8Q6P2Q9 CTSZ-204ENST00000503833 955 ntTSL 1 (best)19■□□□□ 0.633e-6■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-206ENST00000589839 1025 ntTSL 318.77■□□□□ 0.593e-6■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-205ENST00000586272 735 ntTSL 317.64■□□□□ 0.413e-6■□□□□ 10.1
PRPF8Q6P2Q9 TPT1-205ENST00000442760 902 ntTSL 217.36■□□□□ 0.371e-8■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-203ENST00000585700 1562 ntTSL 1 (best)16.79■□□□□ 0.283e-6■□□□□ 10.1
PRPF8Q6P2Q9 SCARF1-204ENST00000570902 1060 ntTSL 1 (best)16.63■□□□□ 0.253e-6■□□□□ 10.1
PRPF8Q6P2Q9 CTSZ-202ENST00000472025 564 ntTSL 216.55■□□□□ 0.243e-6■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-208ENST00000590440 1602 ntTSL 1 (best)16.54■□□□□ 0.243e-6■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-204ENST00000585804 574 ntTSL 415.34■□□□□ 0.053e-6■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-209ENST00000590562 573 ntTSL 414.99□□□□□ -0.013e-6■□□□□ 10.1
PRPF8Q6P2Q9 SCARF1-206ENST00000573852 2698 ntTSL 1 (best)14.17□□□□□ -0.143e-6■□□□□ 10.1
PRPF8Q6P2Q9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.95□□□□□ -0.183e-6■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-211ENST00000421589 824 ntTSL 213.9□□□□□ -0.186e-8■□□□□ 10.1
PRPF8Q6P2Q9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.222e-6■□□□□ 10.1
PRPF8Q6P2Q9 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.293e-6■□□□□ 10.1
PRPF8Q6P2Q9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.33e-6■□□□□ 10.1
PRPF8Q6P2Q9 SCARF1-203ENST00000434376 3342 ntTSL 1 (best)13.12□□□□□ -0.313e-6■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-210ENST00000420216 668 ntTSL 512.47□□□□□ -0.416e-8■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-208ENST00000414893 528 ntTSL 312□□□□□ -0.496e-8■□□□□ 10.1
PRPF8Q6P2Q9 ZNF131-218ENST00000511736 956 ntTSL 1 (best)11.98□□□□□ -0.493e-6■□□□□ 10.1
PRPF8Q6P2Q9 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.63e-6■□□□□ 10.1
PRPF8Q6P2Q9 SCARF1-209ENST00000576012 3292 ntTSL 211.2□□□□□ -0.623e-6■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-209ENST00000417287 610 ntTSL 510.92□□□□□ -0.666e-8■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-214ENST00000435719 817 ntTSL 310.65□□□□□ -0.76e-8■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-207ENST00000414281 772 ntTSL 49.61□□□□□ -0.876e-8■□□□□ 10.1
PRPF8Q6P2Q9 ZNF131-217ENST00000510037 1927 ntTSL 29.08□□□□□ -0.963e-6■□□□□ 10.1
PRPF8Q6P2Q9 ZBTB40-203ENST00000400239 1855 ntTSL 58.89□□□□□ -0.993e-6■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-213ENST00000427843 739 ntTSL 58.63□□□□□ -1.036e-8■□□□□ 10.1
PRPF8Q6P2Q9 KNSTRN-215ENST00000561367 630 ntTSL 28.12□□□□□ -1.113e-6■□□□□ 10.1
PRPF8Q6P2Q9 EPC1-206ENST00000476533 550 ntTSL 37.97□□□□□ -1.133e-6■□□□□ 10.1
PRPF8Q6P2Q9 RAPGEF2-204ENST00000504604 693 ntTSL 57.78□□□□□ -1.163e-6■□□□□ 10.1
PRPF8Q6P2Q9 TEX2-202ENST00000577489 555 ntTSL 57.39□□□□□ -1.233e-6■□□□□ 10.1
PRPF8Q6P2Q9 CAP1-212ENST00000424977 702 ntTSL 57.16□□□□□ -1.266e-8■□□□□ 10.1
PRPF8Q6P2Q9 USP48-207ENST00000471752 445 ntTSL 37.07□□□□□ -1.283e-6■□□□□ 10.1
PRPF8Q6P2Q9 NABP1-209ENST00000462824 567 ntTSL 46□□□□□ -1.453e-6■□□□□ 10.1
PRPF8Q6P2Q9 RPL35A-207ENST00000474640 687 ntTSL 25.77□□□□□ -1.498e-11■□□□□ 10.1
PRPF8Q6P2Q9 NFE2L2-209ENST00000458603 455 ntTSL 34.31□□□□□ -1.722e-9■□□□□ 10.1
PRPF8Q6P2Q9 RAPGEF2-206ENST00000505478 838 ntTSL 53.42□□□□□ -1.863e-6■□□□□ 10.1
PRPF8Q6P2Q9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.18□□□□□ -2.063e-6■□□□□ 10.1
PRPF8Q6P2Q9 PSMD5-202ENST00000373903 686 ntTSL 31.23□□□□□ -2.213e-6■□□□□ 10.1
PRPF8Q6P2Q9 SSB-209ENST00000470621 440 ntTSL 30.23□□□□□ -2.373e-6■□□□□ 10.1
PRPF8Q6P2Q9 SSB-211ENST00000490914 754 ntTSL 50.13□□□□□ -2.393e-6■□□□□ 10.1
PRPF8Q6P2Q9 SETDB1-209ENST00000463774 570 ntTSL 46.03□□□□□ -1.445e-7■□□□□ 10.1
PRPF8Q6P2Q9 RXRA-201ENST00000356384 5770 ntTSL 512.52□□□□□ -0.45e-7■□□□□ 10.1
PRPF8Q6P2Q9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.425e-7■□□□□ 10.1
PRPF8Q6P2Q9 PNISR-206ENST00000476159 537 ntTSL 32.57□□□□□ -24e-7■□□□□ 10.1
PRPF8Q6P2Q9 PNISR-203ENST00000460600 2178 ntTSL 22.27□□□□□ -2.054e-7■□□□□ 10.1
PRPF8Q6P2Q9 PKD1-212ENST00000475889 511 ntTSL 510.73□□□□□ -0.693e-8■□□□□ 10.1
PRPF8Q6P2Q9 SNHG14-216ENST00000551938 1108 ntTSL 22.15□□□□□ -2.075e-14■□□□□ 10.1
PRPF8Q6P2Q9 KANSL3-213ENST00000475820 583 ntTSL 37.51□□□□□ -1.216e-7■□□□□ 10.1
PRPF8Q6P2Q9 EXOC7-210ENST00000460476 555 ntTSL 415.42■□□□□ 0.062e-9■□□□□ 10.1
Retrieved 100 of 73,762 protein–RNA pairs in 631.9 ms