RNA–Protein interactions for RNA: ENST00000529520.5

GPATCH4-214, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-214ENST00000529520 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.89
GPATCH4-214ENST00000529520 ABCC9O60706 1549 aa18.45■□□□□ 0.54
GPATCH4-214ENST00000529520 CCDC180Q9P1Z9 1646 aa18.43■□□□□ 0.54
GPATCH4-214ENST00000529520 RB1CC1Q8TDY2 1594 aa17.52■□□□□ 0.39
GPATCH4-214ENST00000529520 DCAF8L2P0C7V8 631 aa17.41■□□□□ 0.38
GPATCH4-214ENST00000529520 NACADO15069 1562 aa17.4■□□□□ 0.38
GPATCH4-214ENST00000529520 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
GPATCH4-214ENST00000529520 UNC13AQ9UPW8 1703 aa17.28■□□□□ 0.36
GPATCH4-214ENST00000529520 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
GPATCH4-214ENST00000529520 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
GPATCH4-214ENST00000529520 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
GPATCH4-214ENST00000529520 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
GPATCH4-214ENST00000529520 DCAF1Q9Y4B6 1507 aa16.95■□□□□ 0.3
GPATCH4-214ENST00000529520 SCRIBQ14160 1630 aa16.85■□□□□ 0.29
GPATCH4-214ENST00000529520 SHROOM4Q9ULL8 1493 aa16.69■□□□□ 0.26
GPATCH4-214ENST00000529520 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
GPATCH4-214ENST00000529520 EIF4G1Q04637 1599 aaKnown RBP16.63■□□□□ 0.25
GPATCH4-214ENST00000529520 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
GPATCH4-214ENST00000529520 NCAPD3P42695 1498 aa16.08■□□□□ 0.16
GPATCH4-214ENST00000529520 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
GPATCH4-214ENST00000529520 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
GPATCH4-214ENST00000529520 SMARCA2P51531 1590 aa15.96■□□□□ 0.15
GPATCH4-214ENST00000529520 BAZ1AQ9NRL2 1556 aaPredicted RBP15.94■□□□□ 0.14
GPATCH4-214ENST00000529520 HMGXB3Q12766 1538 aa15.94■□□□□ 0.14
GPATCH4-214ENST00000529520 MROH2BQ7Z745 1585 aa15.9■□□□□ 0.14
GPATCH4-214ENST00000529520 NESP48681 1621 aa15.9■□□□□ 0.14
GPATCH4-214ENST00000529520 PEG3Q9GZU2 1588 aa15.87■□□□□ 0.13
GPATCH4-214ENST00000529520 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
GPATCH4-214ENST00000529520 ERCC6Q03468 1493 aa15.86■□□□□ 0.13
GPATCH4-214ENST00000529520 DNAJC5Q9H3Z4 198 aa15.83■□□□□ 0.12
GPATCH4-214ENST00000529520 CUX2O14529 1486 aa15.81■□□□□ 0.12
GPATCH4-214ENST00000529520 WIZO95785 1651 aa15.75■□□□□ 0.11
GPATCH4-214ENST00000529520 LAMC3Q9Y6N6 1575 aa15.7■□□□□ 0.1
GPATCH4-214ENST00000529520 KIF21AQ7Z4S6 1674 aa15.7■□□□□ 0.1
GPATCH4-214ENST00000529520 THOC2Q8NI27 1593 aaKnown RBP15.69■□□□□ 0.1
GPATCH4-214ENST00000529520 CADPSQ9ULU8 1353 aa15.6■□□□□ 0.09
GPATCH4-214ENST00000529520 PDS5BQ9NTI5 1447 aa15.59■□□□□ 0.09
GPATCH4-214ENST00000529520 RSF1Q96T23 1441 aaPredicted RBP15.56■□□□□ 0.08
GPATCH4-214ENST00000529520 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
GPATCH4-214ENST00000529520 TOP2AP11388 1531 aaKnown RBP15.46■□□□□ 0.07
GPATCH4-214ENST00000529520 WDR62O43379 1518 aa15.45■□□□□ 0.06
GPATCH4-214ENST00000529520 CFTRP13569 1480 aa15.43■□□□□ 0.06
GPATCH4-214ENST00000529520 FANCD2Q9BXW9 1451 aa15.42■□□□□ 0.06
GPATCH4-214ENST00000529520 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
GPATCH4-214ENST00000529520 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
GPATCH4-214ENST00000529520 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.05
GPATCH4-214ENST00000529520 URB2Q14146 1524 aaKnown RBP15.33■□□□□ 0.04
GPATCH4-214ENST00000529520 TRIM41Q8WV44 630 aa15.17■□□□□ 0.02
GPATCH4-214ENST00000529520 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
GPATCH4-214ENST00000529520 ZNF608Q9ULD9 1512 aaPredicted RBP15.15■□□□□ 0.02
GPATCH4-214ENST00000529520 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
GPATCH4-214ENST00000529520 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
GPATCH4-214ENST00000529520 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
GPATCH4-214ENST00000529520 ABCC8Q09428 1581 aa15.05■□□□□ -0
GPATCH4-214ENST00000529520 TARBP1Q13395 1621 aaKnown RBP15.04■□□□□ -0
GPATCH4-214ENST00000529520 EIF4G3O43432 1585 aaKnown RBP15.03■□□□□ -0
GPATCH4-214ENST00000529520 AQRO60306 1485 aaKnown RBP eCLIP15.01□□□□□ -0.015e-7■■■■□ 19.7
GPATCH4-214ENST00000529520 POLA1P09884 1462 aaPredicted RBP15□□□□□ -0.01
GPATCH4-214ENST00000529520 RAD54L2Q9Y4B4 1467 aa14.99□□□□□ -0.01
GPATCH4-214ENST00000529520 RIMBP3CA6NJZ7 1639 aa14.98□□□□□ -0.01
GPATCH4-214ENST00000529520 RIMBP3BA6NNM3 1639 aa14.98□□□□□ -0.01
GPATCH4-214ENST00000529520 RIMBP3Q9UFD9 1639 aa14.98□□□□□ -0.01
GPATCH4-214ENST00000529520 CHD1O14646 1710 aa14.97□□□□□ -0.01
GPATCH4-214ENST00000529520 CUX1P39880 1505 aa14.93□□□□□ -0.02
GPATCH4-214ENST00000529520 SUPT5HO00267 1087 aaKnown RBP14.93□□□□□ -0.02
GPATCH4-214ENST00000529520 SOGA1O94964 1423 aa14.92□□□□□ -0.02
GPATCH4-214ENST00000529520 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
GPATCH4-214ENST00000529520 TDRD9Q8NDG6 1382 aaKnown RBP14.91□□□□□ -0.02
GPATCH4-214ENST00000529520 ARHGEF11O15085 1522 aa14.9□□□□□ -0.02
GPATCH4-214ENST00000529520 FBLN2P98095 1184 aa14.88□□□□□ -0.03
GPATCH4-214ENST00000529520 WDR97A6NE52 1622 aa14.84□□□□□ -0.03
GPATCH4-214ENST00000529520 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
GPATCH4-214ENST00000529520 CYB5RLQ6IPT4 315 aa14.82□□□□□ -0.04
GPATCH4-214ENST00000529520 PBRM1Q86U86 1689 aa14.78□□□□□ -0.04
GPATCH4-214ENST00000529520 ARAP1Q96P48 1450 aa14.76□□□□□ -0.05
GPATCH4-214ENST00000529520 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
GPATCH4-214ENST00000529520 CHMP7Q8WUX9 453 aaPredicted RBP14.75□□□□□ -0.05
GPATCH4-214ENST00000529520 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
GPATCH4-214ENST00000529520 CLASP1Q7Z460 1538 aa14.74□□□□□ -0.05
GPATCH4-214ENST00000529520 GAPVD1Q14C86 1478 aa14.74□□□□□ -0.05
GPATCH4-214ENST00000529520 ABCA5Q8WWZ7 1642 aa14.72□□□□□ -0.05
GPATCH4-214ENST00000529520 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
GPATCH4-214ENST00000529520 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
GPATCH4-214ENST00000529520 SYNJ1O43426 1573 aa14.7□□□□□ -0.06
GPATCH4-214ENST00000529520 BIVM-ERCC5R4GMW8 1640 aa14.69□□□□□ -0.06
GPATCH4-214ENST00000529520 TOP2BQ02880 1626 aa14.67□□□□□ -0.06
GPATCH4-214ENST00000529520 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.06
GPATCH4-214ENST00000529520 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
GPATCH4-214ENST00000529520 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
GPATCH4-214ENST00000529520 GRIN2AQ12879 1464 aa14.59□□□□□ -0.07
GPATCH4-214ENST00000529520 ERCC6L2Q5T890 1561 aa14.59□□□□□ -0.07
GPATCH4-214ENST00000529520 CEP170Q5SW79 1584 aa14.58□□□□□ -0.08
GPATCH4-214ENST00000529520 NUP160Q12769 1436 aa14.54□□□□□ -0.08
GPATCH4-214ENST00000529520 ERICH3Q5RHP9 1530 aa14.52□□□□□ -0.08
GPATCH4-214ENST00000529520 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.08
GPATCH4-214ENST00000529520 SHROOM2Q13796 1616 aa14.49□□□□□ -0.09
GPATCH4-214ENST00000529520 JPH4Q96JJ6 628 aa14.42□□□□□ -0.1
GPATCH4-214ENST00000529520 PRG4Q92954 1404 aaPredicted RBP14.41□□□□□ -0.1
GPATCH4-214ENST00000529520 IGF1RP08069 1367 aa14.39□□□□□ -0.11
GPATCH4-214ENST00000529520 RUSC2Q8N2Y8 1516 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms