RNA–Protein interactions for RNA: ENST00000561883.1

SPIRE2-203, Transcript of spire type actin nucleation factor 2, humanhuman

TSL 3

Gene SPIRE2, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-203ENST00000561883 NISCHQ9Y2I1 1504 aa43.06■■■■■ 4.48
SPIRE2-203ENST00000561883 CCDC180Q9P1Z9 1646 aa38.05■■■■□ 3.68
SPIRE2-203ENST00000561883 ABCC9O60706 1549 aa36.97■■■■□ 3.51
SPIRE2-203ENST00000561883 DCAF8L2P0C7V8 631 aa36.04■■■■□ 3.36
SPIRE2-203ENST00000561883 ZCCHC6Q5VYS8 1495 aaKnown RBP35.94■■■■□ 3.34
SPIRE2-203ENST00000561883 NACADO15069 1562 aa35.73■■■■□ 3.31
SPIRE2-203ENST00000561883 RB1CC1Q8TDY2 1594 aa35.69■■■■□ 3.3
SPIRE2-203ENST00000561883 MYO15BQ96JP2 1530 aa35.61■■■■□ 3.29
SPIRE2-203ENST00000561883 DCAF1Q9Y4B6 1507 aa35.61■■■■□ 3.29
SPIRE2-203ENST00000561883 SCRIBQ14160 1630 aa34.83■■■■□ 3.17
SPIRE2-203ENST00000561883 UNC13AQ9UPW8 1703 aa34.75■■■■□ 3.15
SPIRE2-203ENST00000561883 PABPN1Q86U42 306 aaKnown RBP eCLIP34.67■■■■□ 3.14
SPIRE2-203ENST00000561883 BICRAQ9NZM4 1560 aa34.52■■■■□ 3.12
SPIRE2-203ENST00000561883 SHROOM4Q9ULL8 1493 aa34.39■■■■□ 3.1
SPIRE2-203ENST00000561883 EIF4G1Q04637 1599 aaKnown RBP33.63■■■□□ 2.97
SPIRE2-203ENST00000561883 DNAJC5BQ9UF47 199 aa33.53■■■□□ 2.96
SPIRE2-203ENST00000561883 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
SPIRE2-203ENST00000561883 CC2D2AQ9P2K1 1620 aa33.39■■■□□ 2.93
SPIRE2-203ENST00000561883 BAZ1AQ9NRL2 1556 aaPredicted RBP33.37■■■□□ 2.93
SPIRE2-203ENST00000561883 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
SPIRE2-203ENST00000561883 MROH2BQ7Z745 1585 aa33.19■■■□□ 2.9
SPIRE2-203ENST00000561883 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
SPIRE2-203ENST00000561883 SMARCA2P51531 1590 aa33.05■■■□□ 2.88
SPIRE2-203ENST00000561883 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
SPIRE2-203ENST00000561883 NCAPD3P42695 1498 aa32.98■■■□□ 2.87
SPIRE2-203ENST00000561883 PEG3Q9GZU2 1588 aa32.94■■■□□ 2.86
SPIRE2-203ENST00000561883 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
SPIRE2-203ENST00000561883 WIZO95785 1651 aa32.84■■■□□ 2.85
SPIRE2-203ENST00000561883 HMGXB3Q12766 1538 aa32.82■■■□□ 2.85
SPIRE2-203ENST00000561883 SUPT5HO00267 1087 aaKnown RBP32.61■■■□□ 2.81
SPIRE2-203ENST00000561883 TOP2AP11388 1531 aaKnown RBP32.54■■■□□ 2.8
SPIRE2-203ENST00000561883 CCDC88BA6NC98 1476 aa32.17■■■□□ 2.74
SPIRE2-203ENST00000561883 CADPSQ9ULU8 1353 aa32.07■■■□□ 2.73
SPIRE2-203ENST00000561883 NESP48681 1621 aa32.07■■■□□ 2.72
SPIRE2-203ENST00000561883 LAMC3Q9Y6N6 1575 aa32.03■■■□□ 2.72
SPIRE2-203ENST00000561883 CFTRP13569 1480 aa31.93■■■□□ 2.7
SPIRE2-203ENST00000561883 ERCC6Q03468 1493 aa31.89■■■□□ 2.7
SPIRE2-203ENST00000561883 PDS5BQ9NTI5 1447 aa31.88■■■□□ 2.69
SPIRE2-203ENST00000561883 FANCD2Q9BXW9 1451 aa31.71■■■□□ 2.67
SPIRE2-203ENST00000561883 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
SPIRE2-203ENST00000561883 KIF21AQ7Z4S6 1674 aa31.64■■■□□ 2.66
SPIRE2-203ENST00000561883 PRDM2Q13029 1718 aa31.62■■■□□ 2.65
SPIRE2-203ENST00000561883 MRC2Q9UBG0 1479 aa31.5■■■□□ 2.63
SPIRE2-203ENST00000561883 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
SPIRE2-203ENST00000561883 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
SPIRE2-203ENST00000561883 WDR62O43379 1518 aa31.32■■■□□ 2.6
SPIRE2-203ENST00000561883 CUX2O14529 1486 aa31.32■■■□□ 2.6
SPIRE2-203ENST00000561883 ABCC8Q09428 1581 aa31.27■■■□□ 2.6
SPIRE2-203ENST00000561883 TOPBP1Q92547 1522 aa31.22■■■□□ 2.59
SPIRE2-203ENST00000561883 DNMBPQ6XZF7 1577 aa31.21■■■□□ 2.59
SPIRE2-203ENST00000561883 WRNQ14191 1432 aaPredicted RBP eCLIP31.14■■■□□ 2.58
SPIRE2-203ENST00000561883 CUX1P39880 1505 aa31.12■■■□□ 2.57
SPIRE2-203ENST00000561883 FGD5Q6ZNL6 1462 aa30.99■■■□□ 2.55
SPIRE2-203ENST00000561883 POLA1P09884 1462 aaPredicted RBP30.98■■■□□ 2.55
SPIRE2-203ENST00000561883 SYNJ1O43426 1573 aa30.96■■■□□ 2.55
SPIRE2-203ENST00000561883 IFT140Q96RY7 1462 aa30.95■■■□□ 2.55
SPIRE2-203ENST00000561883 TOP2BQ02880 1626 aa30.95■■■□□ 2.54
SPIRE2-203ENST00000561883 SOGA1O94964 1423 aa30.92■■■□□ 2.54
SPIRE2-203ENST00000561883 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
SPIRE2-203ENST00000561883 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
SPIRE2-203ENST00000561883 TARBP1Q13395 1621 aaKnown RBP30.79■■■□□ 2.52
SPIRE2-203ENST00000561883 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
SPIRE2-203ENST00000561883 ZNF608Q9ULD9 1512 aaPredicted RBP30.75■■■□□ 2.51
SPIRE2-203ENST00000561883 TDRD9Q8NDG6 1382 aaKnown RBP30.71■■■□□ 2.51
SPIRE2-203ENST00000561883 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
SPIRE2-203ENST00000561883 AQRO60306 1485 aaKnown RBP eCLIP30.66■■■□□ 2.52e-6■■□□□ 13.6
SPIRE2-203ENST00000561883 EIF4G3O43432 1585 aaKnown RBP30.62■■■□□ 2.49
SPIRE2-203ENST00000561883 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
SPIRE2-203ENST00000561883 WDR97A6NE52 1622 aa30.59■■■□□ 2.49
SPIRE2-203ENST00000561883 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
SPIRE2-203ENST00000561883 GRIN2BQ13224 1484 aa30.5■■■□□ 2.47
SPIRE2-203ENST00000561883 KIF27Q86VH2 1401 aa30.47■■■□□ 2.47
SPIRE2-203ENST00000561883 ABCA5Q8WWZ7 1642 aa30.47■■■□□ 2.47
SPIRE2-203ENST00000561883 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
SPIRE2-203ENST00000561883 PBRM1Q86U86 1689 aa30.36■■■□□ 2.45
SPIRE2-203ENST00000561883 FBLN2P98095 1184 aa30.35■■■□□ 2.45
SPIRE2-203ENST00000561883 MAGI1Q96QZ7 1491 aaPredicted RBP30.35■■■□□ 2.45
SPIRE2-203ENST00000561883 ERICH3Q5RHP9 1530 aa30.32■■■□□ 2.44
SPIRE2-203ENST00000561883 CHMP7Q8WUX9 453 aaPredicted RBP30.3■■■□□ 2.44
SPIRE2-203ENST00000561883 IGF1RP08069 1367 aa30.26■■■□□ 2.43
SPIRE2-203ENST00000561883 RUSC2Q8N2Y8 1516 aa30.25■■■□□ 2.43
SPIRE2-203ENST00000561883 SYNJ2O15056 1496 aa30.24■■■□□ 2.43
SPIRE2-203ENST00000561883 DNAJC5Q9H3Z4 198 aa30.22■■■□□ 2.43
SPIRE2-203ENST00000561883 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
SPIRE2-203ENST00000561883 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
SPIRE2-203ENST00000561883 ADAMTS12P58397 1594 aa30.17■■■□□ 2.42
SPIRE2-203ENST00000561883 FAM9AQ8IZU1 332 aaPredicted RBP30.15■■■□□ 2.42
SPIRE2-203ENST00000561883 EEA1Q15075 1411 aa30.14■■■□□ 2.42
SPIRE2-203ENST00000561883 CARMIL1Q5VZK9 1371 aa30.14■■■□□ 2.41
SPIRE2-203ENST00000561883 CHD1O14646 1710 aa30.13■■■□□ 2.41
SPIRE2-203ENST00000561883 CUL7Q14999 1698 aa30.11■■■□□ 2.41
SPIRE2-203ENST00000561883 CSRNP3Q8WYN3 585 aa30.09■■■□□ 2.41
SPIRE2-203ENST00000561883 GRIN2AQ12879 1464 aa30.08■■■□□ 2.41
SPIRE2-203ENST00000561883 RAPGEF2Q9Y4G8 1499 aa29.97■■■□□ 2.39
SPIRE2-203ENST00000561883 PRXQ9BXM0 1461 aa29.92■■■□□ 2.38
SPIRE2-203ENST00000561883 NUP160Q12769 1436 aa29.9■■■□□ 2.38
SPIRE2-203ENST00000561883 CEP170Q5SW79 1584 aa29.87■■■□□ 2.37
SPIRE2-203ENST00000561883 CLASP1Q7Z460 1538 aa29.81■■■□□ 2.36
SPIRE2-203ENST00000561883 EHMT2Q96KQ7 1210 aa29.76■■■□□ 2.35
SPIRE2-203ENST00000561883 KIAA0586Q9BVV6 1533 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms